RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ASB9Q96DX5 294 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 LRCH3Q96II8 777 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 CDHR1Q96JP9 859 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 TBCBQ99426 244 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 CLK4Q9HAZ1 481 aaKnown RBP13.73□□□□□ -0.21
PCNX3-202ENST00000439247 NRBP2Q9NSY0 501 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 PPEF2O14830 753 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 AKAP10O43572 662 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 DLX3O60479 287 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 PROZP22891 400 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 BNIP3Q12983 259 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 PMS2P3Q13401 168 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 NHSL2Q5HYW2 709 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 LIPMQ5VYY2 423 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 TMEM26Q6ZUK4 368 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 OFCC1Q8IZS5 231 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 FSTL5Q8N475 847 aaPredicted RBP13.73□□□□□ -0.21
PCNX3-202ENST00000439247 CHST13Q8NET6 341 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 BIRC8Q96P09 236 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 DPEP3Q9H4B8 488 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 IL1RL2Q9HB29 575 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 SMOXQ9NWM0 555 aa13.73□□□□□ -0.21
PCNX3-202ENST00000439247 PAIP2BQ9ULR5 123 aaKnown RBP13.73□□□□□ -0.21
PCNX3-202ENST00000439247 TRPM7Q96QT4 1865 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 SOWAHBA6NEL2 793 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 TTC36A6NLP5 189 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 C9JVG2 144 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 FARP2O94887 1054 aaPredicted RBP13.72□□□□□ -0.21
PCNX3-202ENST00000439247 FUCA1P04066 466 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 RHDQ02161 417 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 PRKCQQ04759 706 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 LRRC8EQ6NSJ5 796 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 LYSMD3Q7Z3D4 306 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 SLC41A1Q8IVJ1 513 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 GTSE1Q9NYZ3 720 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 BCAP29Q9UHQ4 241 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 TRIM43BA6NCK2 446 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 UNCXA6NJT0 531 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 DPYSL4O14531 572 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 NMBRP28336 390 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 IFRD2Q12894 506 aaPredicted RBP13.72□□□□□ -0.21
PCNX3-202ENST00000439247 NANOGP8Q6NSW7 305 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 DHRS4L2Q6PKH6 230 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 NCCRP1Q6ZVX7 275 aaPredicted RBP13.72□□□□□ -0.21
PCNX3-202ENST00000439247 CBR4Q8N4T8 237 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 THAP11Q96EK4 314 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 FBXL20Q96IG2 436 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 NT5C1AQ9BXI3 368 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 C1QTNF1Q9BXJ1 281 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 XPR1Q9UBH6 696 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 VANGL2Q9ULK5 521 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 USP3Q9Y6I4 520 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 EVPLQ92817 2033 aa13.72□□□□□ -0.21
PCNX3-202ENST00000439247 ZBTB42B2RXF5 422 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 DLGAP1O14490 977 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 SDHDO14521 159 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 GIPC1O14908 333 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 TADA2AO75478 443 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 ZBTB11O95625 1053 aaPredicted RBP13.71□□□□□ -0.21
PCNX3-202ENST00000439247 ADORA2BP29275 332 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 GRIA3P42263 894 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 NR2C2P49116 596 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 NME5P56597 212 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 RELAQ04206 551 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 STXBP2Q15833 593 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 AGKQ53H12 422 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 C6orf10Q5SRN2 563 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 TTC33Q6PID6 262 aaPredicted RBP13.71□□□□□ -0.21
PCNX3-202ENST00000439247 CNSTQ6PJW8 725 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 C4orf22Q6V702 233 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 ZYG11AQ6WRX3 759 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 KCNMB4Q86W47 210 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 LRRC43Q8N309 656 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 KDM1BQ8NB78 822 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 SLC45A3Q96JT2 553 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 CYP4F12Q9HCS2 524 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 IGSF9Q9P2J2 1179 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 AURKCQ9UQB9 309 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 NUP205Q92621 2012 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 IGKV6D-21A0A0A0MT36 114 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 ATP6AP2A0A1C7CYW4 349 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 KANSL1LA0AUZ9 987 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 K7EPI3 171 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 ADAM23O75077 832 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 ATP6AP2O75787 350 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 C8BP07358 591 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 PORP16435 677 aaPredicted RBP13.71□□□□□ -0.21
PCNX3-202ENST00000439247 CLCN2P51788 898 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 NME3Q13232 169 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 USP10Q14694 798 aaKnown RBP13.71□□□□□ -0.21
PCNX3-202ENST00000439247 SLC10A6Q3KNW5 377 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 AARS2Q5JTZ9 985 aaKnown RBP13.71□□□□□ -0.21
PCNX3-202ENST00000439247 SPANXN3Q5MJ09 141 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 TSTD2Q5T7W7 516 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 NT5DC4Q86YG4 428 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 NXNL1Q96CM4 212 aa13.71□□□□□ -0.21
PCNX3-202ENST00000439247 KLHL8Q9P2G9 620 aaPredicted RBP13.71□□□□□ -0.21
PCNX3-202ENST00000439247 CNOT11Q9UKZ1 510 aaKnown RBP13.71□□□□□ -0.21
PCNX3-202ENST00000439247 MRPL42Q9Y6G3 142 aaKnown RBP13.71□□□□□ -0.21
PCNX3-202ENST00000439247 SCN1AP35498 2009 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms