RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 PEBP4Q96S96 227 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 SPATC1LQ9H0A9 340 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 ZNF408Q9H9D4 720 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 ELP3Q9H9T3 547 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 AP4E1Q9UPM8 1137 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 H3BMQ9 156 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 SERPINB9P50453 376 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 ATXN1P54253 815 aaKnown RBP15.99■□□□□ 0.15
DHFR-201ENST00000439211 CA9Q16790 459 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 NEK10Q6ZWH5 1172 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 HM13Q8TCT9 377 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 LRTOMTQ8WZ04 291 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 COG8Q96MW5 612 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 SDCBP2Q9H190 292 aa15.99■□□□□ 0.15
DHFR-201ENST00000439211 NOL11Q9H8H0 719 aaKnown RBP15.99■□□□□ 0.15
DHFR-201ENST00000439211 TTC34A8MYJ7 566 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 TIMM44O43615 452 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 ICMTO60725 284 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 ATP5BP06576 529 aaKnown RBP15.98■□□□□ 0.15
DHFR-201ENST00000439211 CSH1P0DML2 217 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 CSH2P0DML3 217 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 INSRRP14616 1297 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 EPHA3P29320 983 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 TREML2Q5T2D2 321 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 TTC23LQ6PF05 361 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 MTMR14Q8NCE2 650 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 KBTBD7Q8WVZ9 684 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 DACT3Q96B18 629 aaPredicted RBP15.98■□□□□ 0.15
DHFR-201ENST00000439211 NACC2Q96BF6 587 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 APOL2Q9BQE5 337 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 MINDY3Q9H8M7 445 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 MYO18AQ92614 2054 aaKnown RBP15.98■□□□□ 0.15
DHFR-201ENST00000439211 HBP1O60381 514 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 CCNKO75909 580 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 PIM1P11309 404 aaPredicted RBP15.98■□□□□ 0.15
DHFR-201ENST00000439211 ACAT1P24752 427 aaKnown RBP15.98■□□□□ 0.15
DHFR-201ENST00000439211 CPOXP36551 454 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 ENPEPQ07075 957 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 CHST15Q7LFX5 561 aaPredicted RBP15.98■□□□□ 0.15
DHFR-201ENST00000439211 APOBEC3FQ8IUX4 373 aaKnown RBP15.98■□□□□ 0.15
DHFR-201ENST00000439211 PAF1Q8N7H5 531 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 PSMA8Q8TAA3 256 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 MARK4Q96L34 752 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 XYLT2Q9H1B5 865 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 RPF2Q9H7B2 306 aaKnown RBP15.98■□□□□ 0.15
DHFR-201ENST00000439211 LRRC4Q9HBW1 653 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 CORINQ9Y5Q5 1042 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 RAD51BO15315 384 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 PTPN1P18031 435 aaKnown RBP15.98■□□□□ 0.15
DHFR-201ENST00000439211 MGAT1P26572 445 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 TTLL4Q14679 1199 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 PAGE2BQ5JRK9 111 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 KCTD8Q6ZWB6 473 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 MPP5Q8N3R9 675 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 DLG3Q92796 817 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 PCYT2Q99447 389 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 LGMNQ99538 433 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 CNTN6Q9UQ52 1028 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 TEX264Q9Y6I9 313 aa15.98■□□□□ 0.15
DHFR-201ENST00000439211 MYH9P35579 1960 aaKnown RBP15.97■□□□□ 0.15
DHFR-201ENST00000439211 KCNK1O00180 336 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 B4GALT4O60513 344 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 BMP10O95393 424 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 CD247P20963 164 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 PHTF2Q8N3S3 785 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 TRIM63Q969Q1 353 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 PBXIP1Q96AQ6 731 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 LENG8Q96PV6 779 aaPredicted RBP15.97■□□□□ 0.15
DHFR-201ENST00000439211 NAA50Q9GZZ1 169 aaKnown RBP15.97■□□□□ 0.15
DHFR-201ENST00000439211 CPQQ9Y646 472 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 TRIM16O95361 564 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 GTF2A2P52657 109 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 ECT2LQ008S8 904 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 FXNQ16595 210 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 PPP1R26Q5T8A7 1209 aaPredicted RBP15.97■□□□□ 0.15
DHFR-201ENST00000439211 LAYNQ6UX15 382 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 GATAD2AQ86YP4 633 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 GRAMD2AQ8IUY3 354 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 HACE1Q8IYU2 909 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 POC5Q8NA72 575 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 TFB1MQ8WVM0 346 aaKnown RBP15.97■□□□□ 0.15
DHFR-201ENST00000439211 ZNF669Q96BR6 464 aaPredicted RBP15.97■□□□□ 0.15
DHFR-201ENST00000439211 SGF29Q96ES7 293 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 CNDP1Q96KN2 507 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 DGCR6LQ9BY27 220 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 NEK6Q9HC98 313 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 ADGRA2Q96PE1 1338 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 CILPO75339 1184 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 GPD2P43304 727 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 SEPHS1P49903 392 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 Q3C1V9 767 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 PMF1Q6P1K2 205 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 COLGALT1Q8NBJ5 622 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 PCDH19Q8TAB3 1148 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 RCN3Q96D15 328 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 ACSS2Q9NR19 701 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 ERAP1Q9NZ08 941 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 COPG2Q9UBF2 871 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 HES2Q9Y543 173 aa15.97■□□□□ 0.15
DHFR-201ENST00000439211 SDR42E2A6NKP2 422 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms