RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 MTA1Q13330 715 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 EIF4EBP2Q13542 120 aaPredicted RBP9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 STAT4Q14765 748 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 SHBQ15464 509 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 NAPEPLDQ6IQ20 393 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 OLFML1Q6UWY5 402 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 Q6ZVU0 165 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 MON1BQ7L1V2 547 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 PHLDB2Q86SQ0 1253 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 PHF13Q86YI8 300 aaPredicted RBP9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 MSANTD4Q8NCY6 345 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 PIP4K2CQ8TBX8 421 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 SAP25Q8TEE9 199 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 ARHGEF26Q96DR7 871 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 TRIM11Q96F44 468 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 TSGA10Q9BZW7 698 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 THAP2Q9H0W7 228 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 KCND1Q9NSA2 647 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 MYO1AQ9UBC5 1043 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 TRIM10Q9UDY6 481 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 SARDHQ9UL12 918 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 GUCA1BQ9UMX6 200 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 GPSM3Q9Y4H4 160 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 SNX10Q9Y5X0 201 aa9.41□□□□□ -0.9
AC011228.1-201ENST00000439027 MACROD2A1Z1Q3 448 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 GOLGA6L9A6NEM1 432 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 KPNA3O00505 521 aaPredicted RBP9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 PJA2O43164 708 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 SLC7A4O43246 635 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 ATP9BO43861 1147 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 MAGEC1O60732 1142 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 CNTN5O94779 1100 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 CALB1P05937 261 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 RHOCP08134 193 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 EPHA8P29322 1005 aaPredicted RBP9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 SULT1E1P49888 294 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 CDH4P55283 916 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 CLDN6P56747 220 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 PTP4A2Q12974 167 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 SMAD1Q15797 465 aaKnown RBP9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 PTPN20Q4JDL3 420 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 LRRC31Q6UY01 552 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 SLC26A9Q7LBE3 791 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 PDZD3Q86UT5 571 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 TMPRSS12Q86WS5 348 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 OXR1Q8N573 874 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 MFSD2AQ8NA29 543 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 ATP11CQ8NB49 1132 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 OR52K2Q8NGK3 314 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 KLK6Q92876 244 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 C18orf8Q96DM3 657 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 ALG14Q96F25 216 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 LRIG1Q96JA1 1093 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 VCPIP1Q96JH7 1222 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 SPON2Q9BUD6 331 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 TKTL2Q9H0I9 626 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 KDM4CQ9H3R0 1056 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 WDCPQ9H6R7 721 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 PIGVQ9NUD9 493 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 CTTNBP2NLQ9P2B4 639 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 CNOT8Q9UFF9 292 aaKnown RBP9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 PPM1HQ9ULR3 514 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 DMTF1Q9Y222 760 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 CA5BQ9Y2D0 317 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 PAXBP1Q9Y5B6 917 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 ADAMTS20P59510 1910 aa9.4□□□□□ -0.9
AC011228.1-201ENST00000439027 PLXNA2O75051 1894 aa9.4□□□□□ -0.91
AC011228.1-201ENST00000439027 DOCK9Q9BZ29 2069 aa9.4□□□□□ -0.91
AC011228.1-201ENST00000439027 PRAMEF26H0Y7S4 382 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 GOLGA8SH3BPF8 625 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 MCF2LO15068 1137 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 ALOX15BO15296 676 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 SLC31A1O15431 190 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 LATO43561 262 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 PLRG1O43660 514 aaKnown RBP9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 SNAP91O60641 907 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 RNGTTO60942 597 aaKnown RBP9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 RFPL3O75679 317 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 MT-CO1P00395 513 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 CYP1A2P05177 515 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 C1SP09871 688 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 MYBL1P10243 752 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 TFE3P19532 575 aaPredicted RBP9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 RRM1P23921 792 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 CHRNA3P32297 505 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 HNF1BP35680 557 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 NUDT1P36639 197 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 RECQLP46063 649 aaPredicted RBP9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 NOP2P46087 812 aaKnown RBP9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 GABRB2P47870 512 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 RXRGP48443 463 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 CXCR3P49682 368 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 NAP1L1P55209 391 aaKnown RBP9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 DEUP1Q05D60 604 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 SETMARQ53H47 684 aaPredicted RBP9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 ALFQ53S48 1182 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 BRMS1LQ5PSV4 323 aa9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 FAM102AQ5T9C2 384 aaPredicted RBP9.39□□□□□ -0.91
AC011228.1-201ENST00000439027 AGBL4Q5VU57 503 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms