RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 NFATC3Q12968 1075 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 SGCGQ13326 291 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 PNOCQ13519 176 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 PDE1CQ14123 709 aaPredicted RBP8.04□□□□□ -1.12
LINC00578-201ENST00000439009 DEFB133Q30KQ1 61 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 ALFQ53S48 1182 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 CARD16Q5EG05 197 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 COLEC12Q5KU26 742 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 BRMS1LQ5PSV4 323 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 C6orf132Q5T0Z8 1188 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 OTUD1Q5VV17 481 aaPredicted RBP8.04□□□□□ -1.12
LINC00578-201ENST00000439009 LVRNQ6Q4G3 990 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 OLFML1Q6UWY5 402 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 ZNF783Q6ZMS7 281 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 ATG14Q6ZNE5 492 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 SLC26A9Q7LBE3 791 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 TRIM59Q8IWR1 403 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 FMR1NBQ8N0W7 255 aaPredicted RBP8.04□□□□□ -1.12
LINC00578-201ENST00000439009 PCDH20Q8N6Y1 951 aaKnown RBP8.04□□□□□ -1.12
LINC00578-201ENST00000439009 GRIN3AQ8TCU5 1115 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 LMX1AQ8TE12 382 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 GLMNQ92990 594 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 RAB7BQ96AH8 199 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 ISG20Q96AZ6 181 aaKnown RBP8.04□□□□□ -1.12
LINC00578-201ENST00000439009 TRIM44Q96DX7 344 aaPredicted RBP8.04□□□□□ -1.12
LINC00578-201ENST00000439009 SGF29Q96ES7 293 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 PGAP3Q96FM1 320 aaPredicted RBP8.04□□□□□ -1.12
LINC00578-201ENST00000439009 DHTKD1Q96HY7 919 aaPredicted RBP8.04□□□□□ -1.12
LINC00578-201ENST00000439009 CPXM1Q96SM3 734 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 HEPHQ9BQS7 1158 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 FAM117AQ9C073 453 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 SCAND2PQ9GZW5 306 aaPredicted RBP8.04□□□□□ -1.12
LINC00578-201ENST00000439009 ANLNQ9NQW6 1124 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 RRN3Q9NYV6 651 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 IPO11Q9UI26 975 aaKnown RBP8.04□□□□□ -1.12
LINC00578-201ENST00000439009 PNMA8BQ9ULN7 279 aaPredicted RBP8.04□□□□□ -1.12
LINC00578-201ENST00000439009 PADI4Q9UM07 663 aa8.04□□□□□ -1.12
LINC00578-201ENST00000439009 HEMK1Q9Y5R4 338 aaPredicted RBP8.04□□□□□ -1.12
LINC00578-201ENST00000439009 COL27A1Q8IZC6 1860 aaPredicted RBP8.04□□□□□ -1.12
LINC00578-201ENST00000439009 USP9YO00507 2555 aaPredicted RBP8.03□□□□□ -1.12
LINC00578-201ENST00000439009 AREL1O15033 823 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 CASC3O15234 703 aaKnown RBP8.03□□□□□ -1.12
LINC00578-201ENST00000439009 YY2O15391 372 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 SMC2O95347 1197 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 ADCY5O95622 1261 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 CD160O95971 181 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 AFPP02771 609 aaKnown RBP8.03□□□□□ -1.12
LINC00578-201ENST00000439009 RHOCP08134 193 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 KRT10P13645 584 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 CCKBRP32239 447 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 UGT1A5P35504 534 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 RECQLP46063 649 aaPredicted RBP8.03□□□□□ -1.12
LINC00578-201ENST00000439009 SERPINH1P50454 418 aaKnown RBP8.03□□□□□ -1.12
LINC00578-201ENST00000439009 ADKP55263 362 aaKnown RBP8.03□□□□□ -1.12
LINC00578-201ENST00000439009 UBE2HP62256 183 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 SPIDRQ14159 915 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 PTK2BQ14289 1009 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 DRAP1Q14919 205 aaPredicted RBP8.03□□□□□ -1.12
LINC00578-201ENST00000439009 ZSCAN23Q3MJ62 389 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 TTI2Q6NXR4 508 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 LINGO4Q6UY18 593 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 C11orf57Q6ZUT1 292 aaPredicted RBP8.03□□□□□ -1.12
LINC00578-201ENST00000439009 ENOSF1Q7L5Y1 443 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 PRICKLE2Q7Z3G6 844 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 SDR16C5Q8N3Y7 309 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 PPP1R13BQ96KQ4 1090 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 NPY6RQ99463 290 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 CCDC3Q9BQI4 270 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 LRRC61Q9BV99 259 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 B3GNT4Q9C0J1 378 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 CLPBQ9H078 707 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 INTS2Q9H0H0 1204 aaKnown RBP8.03□□□□□ -1.12
LINC00578-201ENST00000439009 SIK2Q9H0K1 926 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 TNKS2Q9H2K2 1166 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 TCEAL2Q9H3H9 227 aaPredicted RBP8.03□□□□□ -1.12
LINC00578-201ENST00000439009 WDCPQ9H6R7 721 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 ACP6Q9NPH0 428 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 PIGVQ9NUD9 493 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.03□□□□□ -1.12
LINC00578-201ENST00000439009 PCDHGC3Q9UN70 934 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 NOTCH2Q04721 2471 aa8.03□□□□□ -1.12
LINC00578-201ENST00000439009 DOCK9Q9BZ29 2069 aa8.02□□□□□ -1.12
LINC00578-201ENST00000439009 SYNJ2BP-COX16A0A087WUM0 186 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 BECN2A8MW95 431 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 M0QYT0 321 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 PSMA7O14818 248 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 THAP12O43422 761 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 DAB1O75553 588 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 GNA14O95837 355 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 F9P00740 461 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 ANXA6P08133 673 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 KRT5P13647 590 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 CD44P16070 742 aaKnown RBP8.02□□□□□ -1.13
LINC00578-201ENST00000439009 TSHRP16473 764 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 GNA15P30679 374 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 OR1E1P30953 314 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 GGCXP38435 758 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 PPP1R2P41236 205 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 PEX5P50542 639 aa8.02□□□□□ -1.13
LINC00578-201ENST00000439009 CCNHP51946 323 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms