RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 KHSRPQ92945 711 aaKnown RBP eCLIP13.55□□□□□ -0.24
ACTN1-204ENST00000438964 FRMD8Q9BZ67 464 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-204ENST00000438964 CACNA2D2Q9NY47 1150 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 SLC8A2Q9UPR5 921 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 CNTNAP1P78357 1384 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 ARID2Q68CP9 1835 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-204ENST00000438964 IQCF3P0C7M6 154 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 ALDH4A1P30038 563 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 CLCN3P51790 818 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 LIMK2P53671 638 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 FPGSQ05932 587 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 LAMTOR4Q0VGL1 99 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 IFRD2Q12894 506 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-204ENST00000438964 ADRM1Q16186 407 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 FBXO48Q5FWF7 155 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 MFSD4BQ5TF39 518 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 TFAP2CQ92754 450 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 DLG3Q92796 817 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 HPS1Q92902 700 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 BORCS5Q969J3 196 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 TBCCD1Q9NVR7 557 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 BCAP29Q9UHQ4 241 aa13.55□□□□□ -0.24
ACTN1-204ENST00000438964 A0A087WXM4 84 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 MRASO14807 208 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 PPEF2O14830 753 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 CLOCKO15516 846 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 NDUFB5O43674 189 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 ZFXP17010 805 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-204ENST00000438964 KCNA5P22460 613 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 LRPAP1P30533 357 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 CASP2P42575 452 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 LSM3P62310 102 aaKnown RBP13.54□□□□□ -0.24
ACTN1-204ENST00000438964 LAMA3Q16787 3333 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 CCDC92Q53HC0 331 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-204ENST00000438964 METTL21CQ5VZV1 264 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 STEAP4Q687X5 459 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 MAMDC4Q6UXC1 1216 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 NANOGNBQ7Z5D8 188 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 KCNMB4Q86W47 210 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.54□□□□□ -0.24
ACTN1-204ENST00000438964 APBB2Q92870 758 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 TAMM41Q96BW9 452 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 HPDLQ96IR7 371 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 VPS50Q96JG6 964 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 QKIQ96PU8 341 aaKnown RBP eCLIP13.54□□□□□ -0.24
ACTN1-204ENST00000438964 CPNE1Q99829 537 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 CHST12Q9NRB3 414 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 VANGL2Q9ULK5 521 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 USP22Q9UPT9 525 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 MAGED1Q9Y5V3 778 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-204ENST00000438964 GPR25O00155 361 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 SDHDO14521 159 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 SNAP29O95721 258 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 MAGEA6P43360 314 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 PTPN9P43378 593 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 GJA8P48165 433 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 CXCR3P49682 368 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 NSUN2Q08J23 767 aaKnown RBP eCLIP13.54□□□□□ -0.24
ACTN1-204ENST00000438964 ZNF829Q3KNS6 432 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-204ENST00000438964 PDCD4Q53EL6 469 aaKnown RBP13.54□□□□□ -0.24
ACTN1-204ENST00000438964 LIPMQ5VYY2 423 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 ARHGAP17Q68EM7 881 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 SLC2A7Q6PXP3 512 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 CTU1Q7Z7A3 348 aaKnown RBP13.54□□□□□ -0.24
ACTN1-204ENST00000438964 DHFR2Q86XF0 187 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 CEP97Q8IW35 865 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 SIX6OS1Q8N1H7 587 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 TMCO5AQ8N6Q1 288 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 PSD4Q8NDX1 1056 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 PPP1R13LQ8WUF5 828 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 FAM151AQ8WW52 585 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 SEPHS2Q99611 448 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 ANKRD60Q9BZ19 345 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 DRC3Q9H069 523 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 DPEP3Q9H4B8 488 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 FANCEQ9HB96 536 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 DAPK2Q9UIK4 370 aa13.54□□□□□ -0.24
ACTN1-204ENST00000438964 VWA5AO00534 786 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 ASNSP08243 561 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 APLP1P51693 650 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 PPP1R8Q12972 351 aaKnown RBP13.53□□□□□ -0.24
ACTN1-204ENST00000438964 TRIM16LQ309B1 348 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 FUT11Q495W5 492 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 ATF7IP2Q5U623 682 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 ILDR2Q71H61 639 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 SREK1Q8WXA9 508 aaKnown RBP13.53□□□□□ -0.24
ACTN1-204ENST00000438964 GFM2Q969S9 779 aaKnown RBP13.53□□□□□ -0.24
ACTN1-204ENST00000438964 TBCBQ99426 244 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 DGCR6LQ9BY27 220 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 OSBPL2Q9H1P3 480 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 ATXN3LQ9H3M9 355 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 RPF1Q9H9Y2 349 aaKnown RBP13.53□□□□□ -0.24
ACTN1-204ENST00000438964 CFAP99D6REC4 459 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 XYLBO75191 536 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 TADA2AO75478 443 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 GPC4O75487 556 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 GRTP1Q5TC63 336 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 IGFN1Q86VF2 1251 aa13.53□□□□□ -0.24
ACTN1-204ENST00000438964 TMEM151AQ8N4L1 468 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms