RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 ZSCAN30Q86W11 494 aa11.4□□□□□ -0.58
CSTF3-203ENST00000438862 GPBAR1Q8TDU6 330 aa11.4□□□□□ -0.58
CSTF3-203ENST00000438862 SSC4DQ8WTU2 575 aa11.4□□□□□ -0.58
CSTF3-203ENST00000438862 SCG3Q8WXD2 468 aaKnown RBP11.4□□□□□ -0.58
CSTF3-203ENST00000438862 IRGQQ8WZA9 623 aa11.4□□□□□ -0.58
CSTF3-203ENST00000438862 PAGE5Q96GU1 130 aa11.4□□□□□ -0.58
CSTF3-203ENST00000438862 FEM1CQ96JP0 617 aa11.4□□□□□ -0.58
CSTF3-203ENST00000438862 PPP1R13BQ96KQ4 1090 aa11.4□□□□□ -0.58
CSTF3-203ENST00000438862 FCRL2Q96LA5 508 aaPredicted RBP11.4□□□□□ -0.58
CSTF3-203ENST00000438862 CCDC114Q96M63 670 aa11.4□□□□□ -0.58
CSTF3-203ENST00000438862 LENG8Q96PV6 779 aaPredicted RBP11.4□□□□□ -0.58
CSTF3-203ENST00000438862 CLSTN2Q9H4D0 955 aa11.4□□□□□ -0.58
CSTF3-203ENST00000438862 ZNF71Q9NQZ8 489 aaPredicted RBP11.4□□□□□ -0.58
CSTF3-203ENST00000438862 APOBEC3BQ9UH17 382 aaKnown RBP11.4□□□□□ -0.58
CSTF3-203ENST00000438862 TLR6Q9Y2C9 796 aa11.4□□□□□ -0.58
CSTF3-203ENST00000438862 CENPEQ02224 2701 aa11.4□□□□□ -0.58
CSTF3-203ENST00000438862 C2CD3Q4AC94 2353 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 A0A1W2PQM1 296 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 STMND1H3BQB6 276 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 KPNA3O00505 521 aaPredicted RBP11.39□□□□□ -0.59
CSTF3-203ENST00000438862 YY2O15391 372 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 CAPN5O15484 640 aaPredicted RBP11.39□□□□□ -0.59
CSTF3-203ENST00000438862 RPLP0P05388 317 aaKnown RBP11.39□□□□□ -0.59
CSTF3-203ENST00000438862 PDGFRAP16234 1089 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 ITIH1P19827 911 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 POU3F2P20265 443 aaPredicted RBP11.39□□□□□ -0.59
CSTF3-203ENST00000438862 MAPK10P53779 464 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 ZFP36L1Q07352 338 aaKnown RBP11.39□□□□□ -0.59
CSTF3-203ENST00000438862 KLRB1Q12918 225 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 EIF2B5Q13144 721 aaKnown RBP11.39□□□□□ -0.59
CSTF3-203ENST00000438862 LVRNQ6Q4G3 990 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 Q6ZVU0 165 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 UNC13DQ70J99 1090 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 ERN2Q76MJ5 926 aaKnown RBP11.39□□□□□ -0.59
CSTF3-203ENST00000438862 TICAM1Q8IUC6 712 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 LGI2Q8N0V4 545 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 ARL10Q8N8L6 244 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 SLC39A13Q96H72 371 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 SERPINB11Q96P15 392 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 GSDMAQ96QA5 445 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 ANP32EQ9BTT0 268 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 HDAC8Q9BY41 377 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 CPEB1Q9BZB8 566 aaKnown RBP11.39□□□□□ -0.59
CSTF3-203ENST00000438862 SLC13A1Q9BZW2 595 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 NUP62CLQ9H1M0 184 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 LRRN3Q9H3W5 708 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 CISHQ9NSE2 258 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 CUEDC1Q9NWM3 386 aaPredicted RBP11.39□□□□□ -0.59
CSTF3-203ENST00000438862 FOXJ2Q9P0K8 574 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 GULP1Q9UBP9 304 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 TSPAN16Q9UKR8 245 aa11.39□□□□□ -0.59
CSTF3-203ENST00000438862 LRBAP50851 2863 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 UNC13CQ8NB66 2214 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 C9orf172C9J069 976 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 M0QYT0 321 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 MTSS1O43312 755 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 VPS4BO75351 444 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 SMC2O95347 1197 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 LTFP02788 710 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 PRNPP04156 253 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 LCP1P13796 627 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 CHRNA3P32297 505 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 ETV5P41161 510 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 RECQLP46063 649 aaPredicted RBP11.38□□□□□ -0.59
CSTF3-203ENST00000438862 SGCGQ13326 291 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 C1orf61Q13536 156 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 GOLGA7BQ2TAP0 167 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 C1orf220Q5T0J3 134 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 CCDC183Q5T5S1 534 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 RBM43Q6ZSC3 357 aaKnown RBP11.38□□□□□ -0.59
CSTF3-203ENST00000438862 CCAR2Q8N163 923 aaKnown RBP11.38□□□□□ -0.59
CSTF3-203ENST00000438862 SDR16C5Q8N3Y7 309 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 SH2D3CQ8N5H7 860 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 TAS1R2Q8TE23 839 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 NKD1Q969G9 470 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 CCDC47Q96A33 483 aaKnown RBP11.38□□□□□ -0.59
CSTF3-203ENST00000438862 CCDC74AQ96AQ1 378 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 PPP1R16AQ96I34 528 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 CDH19Q9H159 772 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 SLC39A2Q9NP94 309 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 VPS4AQ9UN37 437 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 DOLKQ9UPQ8 538 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 FRMD4BQ9Y2L6 1034 aa11.38□□□□□ -0.59
CSTF3-203ENST00000438862 ZNF891A8MT65 544 aaPredicted RBP11.37□□□□□ -0.59
CSTF3-203ENST00000438862 MAPK13O15264 365 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 SPINT1O43278 529 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 BNIP3LO60238 219 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 CTSLP07711 333 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 SETSIPP0DME0 302 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 TSHRP16473 764 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 TACR2P21452 398 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 ITGB7P26010 798 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 TNFRSF8P28908 595 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 VAMP7P51809 220 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 THOP1P52888 689 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 PFN3P60673 137 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 DPYDQ12882 1025 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 FGL2Q14314 439 aa11.37□□□□□ -0.59
CSTF3-203ENST00000438862 LACTB2Q53H82 288 aaPredicted RBP11.37□□□□□ -0.59
CSTF3-203ENST00000438862 FAXCQ5TGI0 409 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms