RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 CTXN3Q4LDR2 81 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 WASHC2DQ5SRD0 308 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 FRMD7Q6ZUT3 714 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 NUP93Q8N1F7 819 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 PGBD5Q8N414 524 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 TDRD5Q8NAT2 981 aaKnown RBP12.85□□□□□ -0.35
HCG18-236ENST00000438412 CD99L2Q8TCZ2 262 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 FCRL5Q96RD9 977 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 GPR22Q99680 433 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 OLFM1Q99784 485 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 NUF2Q9BZD4 464 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 PRDM16Q9HAZ2 1276 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 CYP4F12Q9HCS2 524 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 RGS18Q9NS28 235 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 RAD54BQ9Y620 910 aa12.85□□□□□ -0.35
HCG18-236ENST00000438412 A0A0U1RQS6 177 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 FAM95CA0A1B0GW59 222 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 ERI2A8K979 691 aaKnown RBP12.84□□□□□ -0.35
HCG18-236ENST00000438412 MUSKO15146 869 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 PSMG1O95456 288 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 HDCP19113 662 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 KCNA5P22460 613 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 HOXC13P31276 330 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 TM4SF4P48230 202 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 HARS2P49590 506 aaKnown RBP12.84□□□□□ -0.35
HCG18-236ENST00000438412 KCNQ1P51787 676 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 TBX4P57082 545 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 INHBEP58166 350 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 MGAT5BQ3V5L5 792 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 ARL13AQ5H913 290 aaPredicted RBP12.84□□□□□ -0.35
HCG18-236ENST00000438412 RTP2Q5QGT7 225 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 TSTD2Q5T7W7 516 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 FBXL22Q6P050 247 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 PRSS55Q6UWB4 352 aaPredicted RBP12.84□□□□□ -0.35
HCG18-236ENST00000438412 SLC24A5Q71RS6 500 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 PTAR1Q7Z6K3 402 aaPredicted RBP12.84□□□□□ -0.35
HCG18-236ENST00000438412 KBTBD2Q8IY47 623 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 ENDOVQ8N8Q3 282 aaKnown RBP12.84□□□□□ -0.35
HCG18-236ENST00000438412 OR52K2Q8NGK3 314 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 RAB3IL1Q8TBN0 382 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 ELMO2Q96JJ3 720 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 TSGA13Q96PP4 275 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 VAT1Q99536 393 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 CATSPERBQ9H7T0 1116 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 TNFRSF12AQ9NP84 129 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 NMRK1Q9NWW6 199 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 ZDHHC2Q9UIJ5 367 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 TCAF1Q9Y4C2 921 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 DNAH14Q0VDD8 3507 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 ADAM12O43184 909 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 PIGNO95427 931 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 MMP2P08253 660 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 TSPAN8P19075 237 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 MSX2P35548 267 aaPredicted RBP12.84□□□□□ -0.35
HCG18-236ENST00000438412 GPNMBQ14956 572 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 PDCD2Q16342 344 aaPredicted RBP12.84□□□□□ -0.35
HCG18-236ENST00000438412 ANO4Q32M45 955 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 PCID2Q5JVF3 399 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 BRMS1LQ5PSV4 323 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 TCHHL1Q5QJ38 904 aaPredicted RBP12.84□□□□□ -0.35
HCG18-236ENST00000438412 C10orf120Q5SQS8 335 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 STXBP5Q5T5C0 1151 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 RNF19BQ6ZMZ0 732 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 PIM3Q86V86 326 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 SCUBE1Q8IWY4 988 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 ZNF683Q8IZ20 524 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 CCNYL1Q8N7R7 359 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 BCL7CQ8WUZ0 217 aaPredicted RBP12.84□□□□□ -0.35
HCG18-236ENST00000438412 RHOJQ9H4E5 214 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 OXSMQ9NWU1 459 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 AAR2Q9Y312 384 aaKnown RBP12.84□□□□□ -0.35
HCG18-236ENST00000438412 PCDHB12Q9Y5F1 795 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 SCN5AQ14524 2016 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 SZT2Q5T011 3432 aa12.84□□□□□ -0.35
HCG18-236ENST00000438412 A0A088AWK7 358 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 A0A0D9SEW6 157 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 TIMM44O43615 452 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 DLX3O60479 287 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 NBNO60934 754 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 BMP1P13497 986 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 HNRNPLP14866 589 aaKnown RBP eCLIP12.83□□□□□ -0.351e-7■□□□□ 10.7
HCG18-236ENST00000438412 CPB1P15086 417 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 TYMPP19971 482 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 DUSP4Q13115 394 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 PTPRRQ15256 657 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 MAPRE1Q15691 268 aaKnown RBP12.83□□□□□ -0.35
HCG18-236ENST00000438412 CCDC6Q16204 474 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 INSCQ1MX18 579 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 CCDC153Q494R4 210 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 RANBP10Q6VN20 620 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 TMPRSS6Q8IU80 811 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 FBXO32Q969P5 355 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 SLC39A13Q96H72 371 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 EXOC2Q96KP1 924 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 CDH19Q9H159 772 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 MARCH4Q9P2E8 410 aaPredicted RBP12.83□□□□□ -0.35
HCG18-236ENST00000438412 TLK1Q9UKI8 766 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 PPM1HQ9ULR3 514 aa12.83□□□□□ -0.35
HCG18-236ENST00000438412 USP34Q70CQ2 3546 aa12.83□□□□□ -0.36
HCG18-236ENST00000438412 CASP8AP2Q9UKL3 1982 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms