RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 RABL2AQ9UBK7 228 aaPredicted RBP10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 A0A1B0GVG6 124 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 A6NHS1 94 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 PSIP1O75475 530 aaKnown RBP10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 STX11O75558 287 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 UGT2B4P06133 528 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 ZNF806P0C7X5 589 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 EIF4BP23588 611 aaKnown RBP10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 RXRGP48443 463 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 OLR1P78380 273 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 MAD2L1Q13257 205 aaPredicted RBP10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 MAMLD1Q13495 774 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 CCNIQ14094 377 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 LRRC38Q5VT99 294 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 TLDC1Q6P9B6 456 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 BHLHB9Q6PI77 547 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 TMEM132CQ8N3T6 1108 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 COPS4Q9BT78 406 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 TPK1Q9H3S4 243 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 DNAJC28Q9NX36 388 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 CMTM6Q9NX76 183 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 MAP2P11137 1827 aaKnown RBP10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 I3L521 148 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 TRAFD1O14545 582 aaPredicted RBP10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 KCNH1O95259 989 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 TOP3BO95985 862 aaKnown RBP10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 FGFR2P21802 821 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 ATP5F1P24539 256 aaPredicted RBP10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 ADGRD1Q6QNK2 874 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 C12orf43Q96C57 262 aaKnown RBP10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 CERS2Q96G23 380 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 REXO5Q96IC2 774 aaKnown RBP10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 CDHR5Q9HBB8 845 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 DDIT4Q9NX09 232 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 ADAM28Q9UKQ2 775 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 PRR12Q9ULL5 1215 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 SNX7Q9UNH6 387 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 A0A0G2JPF8 293 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 HNRNPCL3B7ZW38 293 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 RGS10O43665 173 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 PLA2G6O60733 806 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 CYP7B1O75881 506 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 HNRNPCL4P0DMR1 293 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 ITGAXP20702 1163 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 CRHR1P34998 444 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 SLC9A3P48764 834 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 FASTKD3Q14CZ7 662 aaKnown RBP10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 UNC5AQ6ZN44 842 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 C3orf67Q6ZVT6 689 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 TDRPQ86YL5 185 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 PLEKHO2Q8TD55 490 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 CENPNQ96H22 339 aaPredicted RBP10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 EBNA1BP2Q99848 306 aaKnown RBP10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 IGSF9Q9P2J2 1179 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 PEX16Q9Y5Y5 336 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 STON1Q9Y6Q2 735 aa10.53□□□□□ -0.72
PKNOX1-203ENST00000432907 SF3B1O75533 1304 aaKnown RBP eCLIP10.52□□□□□ -0.723e-6■■■■■ 137.9
PKNOX1-203ENST00000432907 COL3A1P02461 1466 aaPredicted RBP10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 A0A0J9YVX5 310 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 UBE2QL1A1L167 161 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 CYB561D2O14569 222 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 NDUFS2O75306 463 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 HMGCRP04035 888 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 THRBP10828 461 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 PDIA6Q15084 440 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 IL17AQ16552 155 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 SFT2D3Q587I9 215 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 FAAH2Q6GMR7 532 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 TMCO6Q96DC7 493 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 CGRRF1Q99675 332 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 OMDQ99983 421 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 KIFC1Q9BW19 673 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 RHOBTB2Q9BYZ6 727 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 EPB41L4BQ9H329 900 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 ACAD9Q9H845 621 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 SSR3Q9UNL2 185 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 AP3M1Q9Y2T2 418 aa10.52□□□□□ -0.72
PKNOX1-203ENST00000432907 KCNK1O00180 336 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 YES1P07947 543 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 PRDX6P30041 224 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 ADSLP30566 484 aaPredicted RBP10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 CCNG1P51959 295 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 GNG2P59768 71 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 USP39Q53GS9 565 aaKnown RBP10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 FGD3Q5JSP0 725 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 ATF7IP2Q5U623 682 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 DPY19L2Q6NUT2 758 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 CDC73Q6P1J9 531 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 TAF8Q7Z7C8 310 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 ARMC8Q8IUR7 673 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 CRISPLD1Q9H336 500 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 TDRD3Q9H7E2 651 aaKnown RBP10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 PDE10AQ9Y233 779 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 KNDC1Q76NI1 1749 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 SH3PXD2BA1X283 911 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 ANGPTL1O95841 491 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 FYNP06241 537 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 PTGIRP43119 386 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 NR2C2P49116 596 aa10.52□□□□□ -0.73
PKNOX1-203ENST00000432907 STX4Q12846 297 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms