RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 BTN2A3PQ96KV6 586 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 RANBP9Q96S59 729 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 C1QTNF1Q9BXJ1 281 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 ILKAPQ9H0C8 392 aaPredicted RBP13.86□□□□□ -0.19
THBS3-202ENST00000428962 SP110Q9HB58 689 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 ARNT2Q9HBZ2 717 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 TLR8Q9NR97 1041 aaKnown RBP13.86□□□□□ -0.19
THBS3-202ENST00000428962 TREX1Q9NSU2 369 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 IL37Q9NZH6 218 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 PLA2G4CQ9UP65 541 aa13.86□□□□□ -0.19
THBS3-202ENST00000428962 FAM95CA0A1B0GW59 222 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 FAM92AA1XBS5 289 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 ZNF195O14628 629 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 SNUPNO95149 360 aaKnown RBP13.85□□□□□ -0.19
THBS3-202ENST00000428962 PSMG1O95456 288 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 SLC35E2BP0CK96 405 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 SAT1P21673 171 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 HOXD10P28358 340 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 PRDX6P30041 224 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 GCKP35557 465 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 GMPRP36959 345 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 CD151P48509 253 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 SLC12A2P55011 1212 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 ILF2Q12905 390 aaKnown RBP13.85□□□□□ -0.19
THBS3-202ENST00000428962 CMPK2Q5EBM0 449 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 ACSBG2Q5FVE4 666 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 MS4A13Q5J8X5 152 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 SDHAF4Q5VUM1 108 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 ESRP1Q6NXG1 681 aaKnown RBP13.85□□□□□ -0.19
THBS3-202ENST00000428962 KDELC1Q6UW63 502 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 SLC41A1Q8IVJ1 513 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 ULK2Q8IYT8 1036 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 ZNF683Q8IZ20 524 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 ZNF781Q8N8C0 355 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 C2CD4AQ8NCU7 369 aaPredicted RBP13.85□□□□□ -0.19
THBS3-202ENST00000428962 IMP4Q96G21 291 aaKnown RBP13.85□□□□□ -0.19
THBS3-202ENST00000428962 DRC3Q9H069 523 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 TRPV6Q9H1D0 765 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 COMMD8Q9NX08 183 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 RAP2CQ9Y3L5 183 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 IGLV3-10A0A075B6K4 115 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 CCDC85CA6NKD9 419 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 SLCO1B7G3V0H7 640 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 PHGDHO43175 533 aaKnown RBP13.85□□□□□ -0.19
THBS3-202ENST00000428962 F7P08709 466 aaPredicted RBP13.85□□□□□ -0.19
THBS3-202ENST00000428962 ARRB2P32121 409 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 GRK4P32298 578 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 SLC1A2P43004 574 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 PTDSS1P48651 473 aaKnown RBP13.85□□□□□ -0.19
THBS3-202ENST00000428962 GPR15P49685 360 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 MPP1Q00013 466 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 POU4F1Q01851 419 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 EFEMP1Q12805 493 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 SMARCB1Q12824 385 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 MBTPS1Q14703 1052 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 MARC1Q5VT66 337 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 ZNF470Q6ECI4 717 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 LRRC8EQ6NSJ5 796 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 EPGNQ6UW88 154 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 ACVR1CQ8NER5 493 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 STYXQ8WUJ0 223 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 HMCESQ96FZ2 354 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 ELMO2Q96JJ3 720 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 ZNF570Q96NI8 536 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 THTPAQ9BU02 230 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 GATA5Q9BWX5 397 aaPredicted RBP13.85□□□□□ -0.19
THBS3-202ENST00000428962 NOL6Q9H6R4 1146 aaKnown RBP13.85□□□□□ -0.19
THBS3-202ENST00000428962 ELAC1Q9H777 363 aaKnown RBP13.85□□□□□ -0.19
THBS3-202ENST00000428962 COG4Q9H9E3 785 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 BATF3Q9NR55 127 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 CPSF2Q9P2I0 782 aaKnown RBP13.85□□□□□ -0.19
THBS3-202ENST00000428962 DNAJB4Q9UDY4 337 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 RUVBL2Q9Y230 463 aaKnown RBP13.85□□□□□ -0.19
THBS3-202ENST00000428962 LRRC42Q9Y546 428 aa13.85□□□□□ -0.19
THBS3-202ENST00000428962 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.84□□□□□ -0.19
THBS3-202ENST00000428962 TK2O00142 265 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 PAPSS2O95340 614 aaPredicted RBP13.84□□□□□ -0.19
THBS3-202ENST00000428962 PEX11BO96011 259 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 ARNTP27540 789 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 GABRB3P28472 473 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 VHLP40337 213 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 SERPINH1P50454 418 aaKnown RBP13.84□□□□□ -0.19
THBS3-202ENST00000428962 CLNS1AP54105 237 aaKnown RBP13.84□□□□□ -0.19
THBS3-202ENST00000428962 SLC34A1Q06495 639 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 TNK2Q07912 1038 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 PRKAA1Q13131 559 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 CTBP1Q13363 440 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 CNGA3Q16281 694 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 PCSK7Q16549 785 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 NEPROQ6NW34 567 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 NAPRTQ6XQN6 538 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 FAM43BQ6ZT52 329 aaPredicted RBP13.84□□□□□ -0.19
THBS3-202ENST00000428962 TFAP2DQ7Z6R9 452 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 DENND6AQ8IWF6 608 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 SPPL2BQ8TCT7 592 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 KCTD4Q8WVF5 259 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 WDR60Q8WVS4 1066 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 ATP13A1Q9HD20 1204 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 NT5MQ9NPB1 228 aa13.84□□□□□ -0.19
THBS3-202ENST00000428962 MARCH2Q9P0N8 246 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms