RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 SPDYAQ5MJ70 313 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 DENND1CQ8IV53 801 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 THEM5Q8N1Q8 247 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 OR13C4Q8NGS5 318 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 URGCPQ8TCY9 931 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 DEFB118Q96PH6 123 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 TLE6Q9H808 572 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 CNGB3Q9NQW8 809 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 SLC38A7Q9NVC3 462 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 MOCS1Q9NZB8 636 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 PCDHGC4Q9Y5F7 938 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 A0A1B0GVG6 124 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 MUSKO15146 869 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 PLIN3O60664 434 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 FGF3P11487 239 aaPredicted RBP8.48□□□□□ -1.05
CD44-208ENST00000428726 PGAM1P18669 254 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 CALB2P22676 271 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 CES1P23141 567 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 OR1E1P30953 314 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 OR1D2P34982 312 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 MAGEA3P43357 314 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 SGSHP51688 502 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 CDK16Q00536 496 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 CUL3Q13618 768 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 CTC1Q2NKJ3 1217 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 TEDDM1Q5T9Z0 273 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 CLEC6AQ6EIG7 209 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 LRRC8BQ6P9F7 803 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.48□□□□□ -1.05
CD44-208ENST00000428726 C4orf50Q6ZRC1 276 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 SMC1BQ8NDV3 1235 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 BCL7CQ8WUZ0 217 aaPredicted RBP8.48□□□□□ -1.05
CD44-208ENST00000428726 NRG4Q8WWG1 115 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 NSL1Q96IY1 281 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 RAB3IPQ96QF0 476 aaPredicted RBP8.48□□□□□ -1.05
CD44-208ENST00000428726 TM6SF2Q9BZW4 377 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 PIF1Q9H611 641 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 TNFRSF12AQ9NP84 129 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 NMRK1Q9NWW6 199 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 MARCH4Q9P2E8 410 aaPredicted RBP8.48□□□□□ -1.05
CD44-208ENST00000428726 WDFY4Q6ZS81 3184 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 MOXD2PA6NHM9 499 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 IQCF5A8MTL0 148 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 CA12O43570 354 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 OPHN1O60890 802 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 FDFT1P37268 417 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 WNT3AP56704 352 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 TAS2R39P59534 338 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 ECT2LQ008S8 904 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 BIRC2Q13490 618 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 POM121L1PQ3SYA9 428 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 SNX30Q5VWJ9 437 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 FBXL22Q6P050 247 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 HPS6Q86YV9 775 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 ARHGAP12Q8IWW6 846 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 SCG3Q8WXD2 468 aaKnown RBP8.48□□□□□ -1.05
CD44-208ENST00000428726 DNAJC9Q8WXX5 260 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 KCTD13Q8WZ19 329 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 HDAC10Q969S8 669 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 MTBPQ96DY7 904 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 CCDC97Q96F63 343 aaPredicted RBP8.48□□□□□ -1.05
CD44-208ENST00000428726 TBATAQ96M53 351 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 SLC2A13Q96QE2 648 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 FERMT1Q9BQL6 677 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 SP110Q9HB58 689 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 XPR1Q9UBH6 696 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 UXTQ9UBK9 157 aaPredicted RBP8.48□□□□□ -1.05
CD44-208ENST00000428726 CIDEBQ9UHD4 219 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 TLK1Q9UKI8 766 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 Q9Y3F1 56 aa8.48□□□□□ -1.05
CD44-208ENST00000428726 HBS1LQ9Y450 684 aaKnown RBP8.48□□□□□ -1.05
CD44-208ENST00000428726 KRT87PA6NCN2 255 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 CBX4O00257 560 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 GSC2O15499 205 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 NBNO60934 754 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 TBX10O75333 385 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 SMNDC1O75940 238 aaKnown RBP eCLIP8.47□□□□□ -1.05
CD44-208ENST00000428726 SIX3O95343 332 aaPredicted RBP8.47□□□□□ -1.05
CD44-208ENST00000428726 PIGNO95427 931 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 INHAP05111 366 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 SLC10A3P09131 477 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 SLC1A2P43004 574 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 RASSF2P50749 326 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 TBX4P57082 545 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 NIPAL4Q0D2K0 466 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 DLG1Q12959 904 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 SLC12A1Q13621 1099 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 PPP1R3AQ16821 1122 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 ARMC12Q5T9G4 340 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 KIAA1841Q6NSI8 718 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 TEX9Q8N6V9 391 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 TEKT5Q96M29 485 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 GATA5Q9BWX5 397 aaPredicted RBP8.47□□□□□ -1.05
CD44-208ENST00000428726 COG4Q9H9E3 785 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 LRFN2Q9ULH4 789 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 IRAK2O43187 625 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 ZBTB14O43829 449 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 MAFKO60675 156 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 TGDSO95455 350 aa8.47□□□□□ -1.05
CD44-208ENST00000428726 AP2A1O95782 977 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms