RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 UBQLN1Q9UMX0 589 aaKnown RBP13.56□□□□□ -0.24
USP42-203ENST00000426246 A0A0U1RQS6 177 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 TGDSO95455 350 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 STAU1O95793 577 aaKnown RBP13.56□□□□□ -0.24
USP42-203ENST00000426246 CLIC3O95833 236 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 CLPTM1O96005 669 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 UGT1A6P19224 532 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 PTPN3P26045 913 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 FDFT1P37268 417 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 CSE1LP55060 971 aaKnown RBP13.56□□□□□ -0.24
USP42-203ENST00000426246 FAM83EQ2M2I3 478 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 MAP3K21Q5TCX8 1036 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 GDF6Q6KF10 455 aaPredicted RBP13.56□□□□□ -0.24
USP42-203ENST00000426246 FSTL5Q8N475 847 aaPredicted RBP13.56□□□□□ -0.24
USP42-203ENST00000426246 HIC2Q96JB3 615 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 SENP8Q96LD8 212 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 MRPL1Q9BYD6 325 aaKnown RBP13.56□□□□□ -0.24
USP42-203ENST00000426246 FAM8A1Q9UBU6 413 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 ACOT9Q9Y305 439 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 F8W810 466 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 LRIG2O94898 1065 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 PSMC3P17980 439 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 CRYBB1P53674 252 aaPredicted RBP13.55□□□□□ -0.24
USP42-203ENST00000426246 CDH15P55291 814 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 CCNIQ14094 377 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 TEX44Q53QW1 395 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 XKR4Q5GH76 650 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 GNASQ5JWF2 1037 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 MFSD14CQ5VZR4 134 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 CIR1Q86X95 450 aaPredicted RBP13.55□□□□□ -0.24
USP42-203ENST00000426246 PPP2R3CQ969Q6 453 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 QKIQ96PU8 341 aaKnown RBP eCLIP13.55□□□□□ -0.24
USP42-203ENST00000426246 FRMD8P1Q9BZ68 369 aaPredicted RBP13.55□□□□□ -0.24
USP42-203ENST00000426246 GON4LQ3T8J9 2241 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 C15orf38-AP3S2A0A0A6YYH1 394 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 CKMT2P17540 419 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 ADRA1BP35368 520 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 LILRA4P59901 499 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 CNPY1Q3B7I2 92 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 MTX3Q5HYI7 312 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 ARPINQ7Z6K5 226 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 PSTKQ8IV42 348 aaKnown RBP13.55□□□□□ -0.24
USP42-203ENST00000426246 ARNTL2Q8WYA1 636 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 EPAS1Q99814 870 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 MTG1Q9BT17 334 aaPredicted RBP13.55□□□□□ -0.24
USP42-203ENST00000426246 ALG9Q9H6U8 611 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 ARHGEF38Q9NXL2 777 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 BTRCQ9Y297 605 aa13.55□□□□□ -0.24
USP42-203ENST00000426246 ZNF839A8K0R7 811 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 HNRNPRO43390 633 aaKnown RBP13.54□□□□□ -0.24
USP42-203ENST00000426246 GCATO75600 419 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 ELNP15502 786 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 NPR3P17342 541 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 EEF1B2P24534 225 aaKnown RBP13.54□□□□□ -0.24
USP42-203ENST00000426246 CLCNKBP51801 687 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 SEMA5AQ13591 1074 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 LAMB3Q13751 1172 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 RARS2Q5T160 578 aaKnown RBP13.54□□□□□ -0.24
USP42-203ENST00000426246 ARRDC4Q8NCT1 418 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 SERPINI1Q99574 410 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 BRD8Q9H0E9 1235 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 MYO9BQ13459 2157 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 CROCCQ5TZA2 2017 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 CAPN14A8MX76 684 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 KPNA6O60684 536 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 SOAT2O75908 522 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 PARNO95453 639 aaKnown RBP13.54□□□□□ -0.24
USP42-203ENST00000426246 STMN1P16949 149 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 CA8P35219 290 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 SP3Q02447 781 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 CAPRIN1Q14444 709 aaKnown RBP13.54□□□□□ -0.24
USP42-203ENST00000426246 DPYSL2Q16555 572 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 TMEM110Q86TL2 294 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 PARP8Q8N3A8 854 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 CDH19Q9H159 772 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 CREBZFQ9NS37 354 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.54□□□□□ -0.24
USP42-203ENST00000426246 FAM50BQ9Y247 325 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 FAM95CA0A1B0GW59 222 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 NR5A2O00482 541 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 CCDC166P0CW27 439 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 GRK2P25098 689 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 YWHAQP27348 245 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 AXLP30530 894 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 ITGA7Q13683 1181 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 DEFB115Q30KQ5 88 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 SLC25A52Q3SY17 297 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 RBM20Q5T481 1227 aaKnown RBP13.54□□□□□ -0.24
USP42-203ENST00000426246 MIPOL1Q8TD10 442 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 PCED1BQ96HM7 432 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 SORT1Q99523 831 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 NACA2Q9H009 215 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 GPAMQ9HCL2 828 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 DERAQ9Y315 318 aa13.54□□□□□ -0.24
USP42-203ENST00000426246 NUP214P35658 2090 aaPredicted RBP13.54□□□□□ -0.24
USP42-203ENST00000426246 AGRPO00253 132 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 TRAFD1O14545 582 aaPredicted RBP13.53□□□□□ -0.24
USP42-203ENST00000426246 TIPRLO75663 272 aa13.53□□□□□ -0.24
USP42-203ENST00000426246 CST5P28325 142 aaPredicted RBP13.53□□□□□ -0.24
USP42-203ENST00000426246 RPL14P50914 215 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms