RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 IRAK1BP1Q5VVH5 260 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 IRF2BP2Q7Z5L9 587 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 COLGALT2Q8IYK4 626 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 STAG3L4Q8TBR4 150 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 MAGEC3Q8TD91 643 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 ZNF670Q9BS34 389 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 XRN2Q9H0D6 950 aaKnown RBP eCLIP8□□□□□ -1.13
CTNND1-207ENST00000426142 RIBC2Q9H4K1 309 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 PDZD7Q9H5P4 517 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 ARMC7Q9H6L4 198 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 ZSCAN32Q9NX65 697 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 MORF4L1Q9UBU8 362 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 SLC12A4Q9UP95 1085 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 ENTPD4Q9Y227 616 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 PCDHB9Q9Y5E1 797 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 FAM237AA0A1B0GTK4 181 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 ATG7O95352 703 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 FGRP09769 529 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 TFEBP19484 476 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 GLUD2P49448 558 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 TTMPQ5BVD1 217 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 SPRYD7Q5W111 196 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 FOXR1Q6PIV2 292 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 LBX2Q6XYB7 198 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 KYAT3Q6YP21 454 aaKnown RBP8□□□□□ -1.13
CTNND1-207ENST00000426142 TNS4Q8IZW8 715 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 EFCAB3Q8N7B9 438 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 LRRC52Q8N7C0 313 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 PRELID2Q8N945 189 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 OR10G6Q8NH81 332 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 CAPNS2Q96L46 248 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 FERD3LQ96RJ6 166 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 DPEP3Q9H4B8 488 aa8□□□□□ -1.13
CTNND1-207ENST00000426142 COL1A2P08123 1366 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 TSPAN1O60635 241 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 PROCP04070 461 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 ITGAVP06756 1048 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 PAGE2BQ5JRK9 111 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 RFWD3Q6PCD5 774 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 LUZP2Q86TE4 346 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 COMMD2Q86X83 199 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 C7orf61Q8IZ16 206 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 GDPD5Q8WTR4 605 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 TNFRSF25Q93038 417 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 MAML3Q96JK9 1138 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 CPXM1Q96SM3 734 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 SLC4A5Q9BY07 1137 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 TLE6Q9H808 572 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 CAB39LQ9H9S4 337 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 PCDH12Q9NPG4 1184 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 PACSIN3Q9UKS6 424 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 GSAPA4D1B5 854 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 PEX1O43933 1283 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 BMP10O95393 424 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 FYNP06241 537 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 ALADP13716 330 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 EPORP19235 508 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 MC4RP32245 332 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 PPM1AP35813 382 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 GRIA4P48058 902 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 CDK7P50613 346 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 PRKAA2P54646 552 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 CDK16Q00536 496 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 BMT2Q1RMZ1 405 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 LRRC38Q5VT99 294 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 TSHZ1Q6ZSZ6 1077 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 TMPRSS6Q8IU80 811 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 FLCNQ8NFG4 579 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 HDAC10Q969S8 669 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 DCLRE1BQ9H816 532 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 RICTORQ6R327 1708 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 SEPT4O43236 478 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 LRPAP1P30533 357 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 TTPAP49638 278 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 NEK3P51956 506 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 RTP1P59025 263 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 PTPN20Q4JDL3 420 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 EID3Q8N140 333 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 DPP10Q8N608 796 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 ZNF557Q8N988 423 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-207ENST00000426142 ATXN2LQ8WWM7 1075 aaKnown RBP7.99□□□□□ -1.13
CTNND1-207ENST00000426142 ING5Q8WYH8 240 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 LRRC39Q96DD0 335 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 MTERF3Q96E29 417 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 CNGB3Q9NQW8 809 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 TRMT13Q9NUP7 481 aaKnown RBP7.99□□□□□ -1.13
CTNND1-207ENST00000426142 ADPRHL2Q9NX46 363 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 RAB21Q9UL25 225 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 MYOM1P52179 1685 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.99□□□□□ -1.13
CTNND1-207ENST00000426142 SOWAHBA6NEL2 793 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 H3BMM5 538 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 VPS4BO75351 444 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 EPN2O95208 641 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 ATP6V1G2O95670 118 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 DLGAP3O95886 979 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 PSMB9P28065 219 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 NCF4Q15080 339 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 GSTA3Q16772 222 aa7.99□□□□□ -1.13
CTNND1-207ENST00000426142 XKR6Q5GH73 641 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms