RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 TBCBQ99426 244 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 CLK4Q9HAZ1 481 aaKnown RBP13.65□□□□□ -0.22
LRCH3-203ENST00000425562 OXSMQ9NWU1 459 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 PLK2Q9NYY3 685 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 BARX2Q9UMQ3 279 aaPredicted RBP13.65□□□□□ -0.22
LRCH3-203ENST00000425562 PCDHGA7Q9Y5G6 932 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 CORINQ9Y5Q5 1042 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 CITO14578 2027 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 FBP2O00757 339 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 CHRM3P20309 590 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 CES1P23141 567 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 C21orf59P57076 290 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 RELAQ04206 551 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 CAPRIN1Q14444 709 aaKnown RBP13.65□□□□□ -0.22
LRCH3-203ENST00000425562 TMEM132DQ14C87 1099 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 SURF1Q15526 300 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 CCDC153Q494R4 210 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 NANOGP8Q6NSW7 305 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 CTU1Q7Z7A3 348 aaKnown RBP13.65□□□□□ -0.22
LRCH3-203ENST00000425562 FAM35AQ86V20 835 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 IFNLR1Q8IU57 520 aaPredicted RBP13.65□□□□□ -0.22
LRCH3-203ENST00000425562 SPPL2CQ8IUH8 684 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 DENND6AQ8IWF6 608 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 PARP8Q8N3A8 854 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 EXT2Q93063 718 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 NXNL1Q96CM4 212 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 FTHL17Q9BXU8 183 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 FAM96AQ9H5X1 160 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 TBC1D23Q9NUY8 699 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 RAP2CQ9Y3L5 183 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 TRIM38O00635 465 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 ADAM23O75077 832 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 ALDH1A2O94788 518 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 NMBRP28336 390 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 TRIM25Q14258 630 aaKnown RBP13.65□□□□□ -0.22
LRCH3-203ENST00000425562 CYP2A13Q16696 494 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 CLEC6AQ6EIG7 209 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 CARM1Q86X55 608 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 RIOX2Q8IUF8 465 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 LSMEM2Q8N112 164 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.65□□□□□ -0.22
LRCH3-203ENST00000425562 SREK1Q8WXA9 508 aaKnown RBP13.65□□□□□ -0.22
LRCH3-203ENST00000425562 ABHD8Q96I13 439 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 QKIQ96PU8 341 aaKnown RBP eCLIP13.65□□□□□ -0.221e-8■■■■□ 22.4
LRCH3-203ENST00000425562 C2orf40Q9H1Z8 148 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 PDZD7Q9H5P4 517 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 PCDH12Q9NPG4 1184 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 PNPLA3Q9NST1 481 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 VANGL2Q9ULK5 521 aa13.65□□□□□ -0.22
LRCH3-203ENST00000425562 DLX3O60479 287 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 SBK3P0C264 359 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 EDNRBP24530 442 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 BAG6P46379 1132 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 CD97P48960 835 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 CLCN2P51788 898 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 MPP1Q00013 466 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 PRKCQQ04759 706 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 CARTPTQ16568 116 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 ZIK1Q3SY52 487 aaPredicted RBP13.64□□□□□ -0.23
LRCH3-203ENST00000425562 PERM1Q5SV97 790 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 GPR180Q86V85 440 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 KCNMB4Q86W47 210 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 APOBEC3FQ8IUX4 373 aaKnown RBP13.64□□□□□ -0.23
LRCH3-203ENST00000425562 CENPSQ8N2Z9 138 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 LZTR1Q8N653 840 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 OR6B3Q8NGW1 331 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 LZICQ8WZA0 190 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 APBB2Q92870 758 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 CNDP1Q96KN2 507 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 FAM167AQ96KS9 214 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 CPNE1Q99829 537 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 MTG1Q9BT17 334 aaPredicted RBP13.64□□□□□ -0.23
LRCH3-203ENST00000425562 ATXN3LQ9H3M9 355 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 GBA2Q9HCG7 927 aaPredicted RBP13.64□□□□□ -0.23
LRCH3-203ENST00000425562 CHST12Q9NRB3 414 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 DUS2Q9NX74 493 aaKnown RBP13.64□□□□□ -0.23
LRCH3-203ENST00000425562 DPP3Q9NY33 737 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 PTGDR2Q9Y5Y4 395 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 DGKBQ9Y6T7 804 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 TNS1Q9HBL0 1735 aaKnown RBP13.64□□□□□ -0.23
LRCH3-203ENST00000425562 FUOMA2VDF0 154 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 A8MU76 341 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 VDRP11473 427 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 ARL4AP40617 200 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 HALP42357 657 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 ALDH3B2P48448 385 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 LIMK2P53671 638 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 SLC6A3Q01959 620 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 GRM1Q13255 1194 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 ZC3H7AQ8IWR0 971 aaKnown RBP13.64□□□□□ -0.23
LRCH3-203ENST00000425562 PLEKHA8Q96JA3 519 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 ZNF597Q96LX8 424 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 ZNF670Q9BS34 389 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 VPS33BQ9H267 617 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 RMI1Q9H9A7 625 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 NME7Q9Y5B8 376 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 SNX10Q9Y5X0 201 aa13.64□□□□□ -0.23
LRCH3-203ENST00000425562 IGKV6-21A0A0C4DH24 114 aa13.63□□□□□ -0.23
LRCH3-203ENST00000425562 TMEM221A6NGB7 291 aa13.63□□□□□ -0.23
LRCH3-203ENST00000425562 PRDX6P30041 224 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms