RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 IL1RAPL1Q9NZN1 696 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 SH3BP1Q9Y3L3 701 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 DOCK6Q96HP0 2047 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 TYROBPO43914 113 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 ZMPSTE24O75844 475 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 LUC7L3O95232 432 aaKnown RBP21.25■□□□□ 0.99
GPC1-202ENST00000420138 FGF19O95750 216 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 MZF1P28698 734 aaPredicted RBP21.25■□□□□ 0.99
GPC1-202ENST00000420138 ARF5P84085 180 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 PCSK7Q16549 785 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 KDELC2Q7Z4H8 507 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 CMTM8Q8IZV2 173 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 CARNMT1Q8N4J0 409 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 TTC16Q8NEE8 873 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 ZNF669Q96BR6 464 aaPredicted RBP21.25■□□□□ 0.99
GPC1-202ENST00000420138 CERS2Q96G23 380 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 SERAC1Q96JX3 654 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 NSMCE3Q96MG7 304 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 PSKH2Q96QS6 385 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 SEMA3CQ99985 751 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 MGME1Q9BQP7 344 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 FSD1LQ9BXM9 530 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 POLR1EQ9GZS1 481 aaKnown RBP21.25■□□□□ 0.99
GPC1-202ENST00000420138 LMAN2LQ9H0V9 348 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 KCNK9Q9NPC2 374 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 ZNF510Q9Y2H8 683 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 IKBKGQ9Y6K9 419 aa21.25■□□□□ 0.99
GPC1-202ENST00000420138 TRANK1O15050 2925 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 IQANK1A0A1B0GTG1 560 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 PRPF4O43172 522 aaKnown RBP eCLIP21.24■□□□□ 0.99
GPC1-202ENST00000420138 SPAG7O75391 227 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 KRT4P19013 534 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 NMBRP28336 390 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 ZNF235Q14590 738 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 RNF43Q68DV7 783 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 ZNF449Q6P9G9 518 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 MICALCLQ6ZW33 695 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.24■□□□□ 0.99
GPC1-202ENST00000420138 SH3RF2Q8TEC5 729 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 DENND1AQ8TEH3 1009 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 CHMP6Q96FZ7 201 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 CCDC134Q9H6E4 229 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 TASP1Q9H6P5 420 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 UBA2Q9UBT2 640 aaPredicted RBP21.24■□□□□ 0.99
GPC1-202ENST00000420138 GGA2Q9UJY4 613 aa21.24■□□□□ 0.99
GPC1-202ENST00000420138 LOC285095A0A1B0GVY8 99 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 H0Y626 953 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 ERVK-10P10266 1014 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 DDX6P26196 483 aaKnown RBP eCLIP21.23■□□□□ 0.99
GPC1-202ENST00000420138 RGRP47804 291 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 SLC18A1P54219 525 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 MGAT5Q09328 741 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 CYTH1Q15438 398 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 PCID2Q5JVF3 399 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 ZNF697Q5TEC3 545 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 TDRD5Q8NAT2 981 aaKnown RBP21.23■□□□□ 0.99
GPC1-202ENST00000420138 USP13Q92995 863 aaPredicted RBP21.23■□□□□ 0.99
GPC1-202ENST00000420138 SMC6Q96SB8 1091 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 FEM1AQ9BSK4 669 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 PRKD2Q9BZL6 878 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 MUC3BQ9H195 1237 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 SSU72Q9NP77 194 aaKnown RBP21.23■□□□□ 0.99
GPC1-202ENST00000420138 ZDHHC7Q9NXF8 308 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 PSAT1Q9Y617 370 aa21.23■□□□□ 0.99
GPC1-202ENST00000420138 FAM47DPA6NHR8 397 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 CBX4O00257 560 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 SNAP91O60641 907 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 ATXN1LP0C7T5 689 aaKnown RBP21.22■□□□□ 0.99
GPC1-202ENST00000420138 CR2P20023 1033 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 RFTN1Q14699 578 aaPredicted RBP21.22■□□□□ 0.99
GPC1-202ENST00000420138 POU6F1Q14863 301 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 LRRC14Q15048 493 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 MPP7Q5T2T1 576 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 PKN3Q6P5Z2 889 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 GRASPQ7Z6J2 395 aaPredicted RBP21.22■□□□□ 0.99
GPC1-202ENST00000420138 ANKRD42Q8N9B4 389 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 BHMTQ93088 406 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 TLE6Q9H808 572 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 SEPT3Q9UH03 358 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 DPP7Q9UHL4 492 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 CLEC4EQ9ULY5 219 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 EPOPA6NHQ4 379 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 XYLBO75191 536 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 SNRPAP09012 282 aaKnown RBP21.22■□□□□ 0.99
GPC1-202ENST00000420138 POU2F2P09086 479 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 CSKP41240 450 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 SMAD1Q15797 465 aaKnown RBP21.22■□□□□ 0.99
GPC1-202ENST00000420138 BANPQ8N9N5 519 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 LEMD2Q8NC56 503 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 MGARPQ8TDB4 240 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 TIFAQ96CG3 184 aa21.22■□□□□ 0.99
GPC1-202ENST00000420138 KLF6Q99612 283 aaPredicted RBP21.22■□□□□ 0.99
GPC1-202ENST00000420138 CCDC195A0A1B0GUA6 201 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 E2F8A0AVK6 867 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 TRIM49D1C9J1S8 452 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 DRD4P21917 467 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 AVPR1AP37288 418 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 WDR4P57081 412 aaKnown RBP21.21■□□□□ 0.99
GPC1-202ENST00000420138 NAB1Q13506 487 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 BMPR2Q13873 1038 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms