RNA–Protein interactions for RNA: ENST00000419286.2

ATM-202, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-202ENST00000419286 HMBOX1Q6NT76 420 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 PDXDC1Q6P996 788 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 SLC46A3Q7Z3Q1 461 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 RNF144BQ7Z419 303 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 SZRD1Q7Z422 152 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 PRPF39Q86UA1 669 aaKnown RBP4.42□□□□□ -1.7
ATM-202ENST00000419286 RHPN2Q8IUC4 686 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 ADGRF2Q8IZF7 708 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 CNTROBQ8N137 903 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 SRBD1Q8N5C6 995 aaKnown RBP4.42□□□□□ -1.7
ATM-202ENST00000419286 CADM4Q8NFZ8 388 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 BCAS4Q8TDM0 211 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 JAKMIP2Q96AA8 810 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 ZNF347Q96SE7 839 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 GATA5Q9BWX5 397 aaPredicted RBP4.42□□□□□ -1.7
ATM-202ENST00000419286 STRA6Q9BX79 667 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 MAK16Q9BXY0 300 aaKnown RBP4.42□□□□□ -1.7
ATM-202ENST00000419286 SH2D4AQ9H788 454 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 KAT14Q9H8E8 782 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 Q9N2J8 555 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 PCDHB16Q9NRJ7 776 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 IPO11Q9UI26 975 aaKnown RBP4.42□□□□□ -1.7
ATM-202ENST00000419286 ZNF215Q9UL58 517 aaPredicted RBP4.42□□□□□ -1.7
ATM-202ENST00000419286 CORO1CQ9ULV4 474 aaPredicted RBP4.42□□□□□ -1.7
ATM-202ENST00000419286 SLC8A2Q9UPR5 921 aa4.42□□□□□ -1.7
ATM-202ENST00000419286 C17orf100A8MU93 164 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 HNRNPCL1O60812 293 aaKnown RBP4.41□□□□□ -1.7
ATM-202ENST00000419286 RNF8O76064 485 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 ADAP00813 363 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 IL1AP01583 271 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 NR2F1P10589 423 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 AKR1B1P15121 316 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 IDUAP35475 653 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 ACTN2P35609 894 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 SOX2P48431 317 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 TAF11Q15544 211 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 RPE65Q16518 533 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 HIST2H2ACQ16777 129 aaPredicted RBP4.41□□□□□ -1.7
ATM-202ENST00000419286 ZNF667Q5HYK9 610 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 PRAMEF17Q5VTA0 474 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 ZNF66Q6ZN08 573 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 RBM44Q6ZP01 1051 aaKnown RBP4.41□□□□□ -1.7
ATM-202ENST00000419286 FAM160B2Q86V87 743 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 CHSY1Q86X52 802 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 TICAM1Q8IUC6 712 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 ARHGAP12Q8IWW6 846 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 TMEM116Q8NCL8 245 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 WIPF2Q8TF74 440 aaPredicted RBP4.41□□□□□ -1.7
ATM-202ENST00000419286 HDAC7Q8WUI4 952 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 TMEM170AQ8WVE7 144 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 PIGKQ92643 395 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 PGAM5Q96HS1 289 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 NCAPGQ9BPX3 1015 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 SLC32A1Q9H598 525 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 ATP8A2Q9NTI2 1148 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 C20orf141Q9NUB4 165 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.41□□□□□ -1.7
ATM-202ENST00000419286 MORF4L1Q9UBU8 362 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 HSPB7Q9UBY9 170 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 A4GNTQ9UNA3 340 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 MTMR6Q9Y217 621 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 PCDHGB5Q9Y5G0 923 aa4.41□□□□□ -1.7
ATM-202ENST00000419286 COL3A1P02461 1466 aaPredicted RBP4.41□□□□□ -1.7
ATM-202ENST00000419286 PABPN1LA6NDY0 278 aaKnown RBP4.4□□□□□ -1.71
ATM-202ENST00000419286 USP17L23D6RBM5 183 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 SCAMP1O15126 338 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 MSI1O43347 362 aaKnown RBP4.4□□□□□ -1.71
ATM-202ENST00000419286 PAGE4O60829 102 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 TACC1O75410 805 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 CBX6O95503 412 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 LATS1O95835 1130 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 CELA2AP08217 269 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 CD63P08962 238 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 CYP2D6P10635 497 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 PTPN2P17706 415 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 TFEBP19484 476 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 YWHAQP27348 245 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 ICAM3P32942 547 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 PTGER1P34995 402 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 ABCG1P45844 678 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 SLC12A2P55011 1212 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 SNX16P57768 344 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 IRX6P78412 446 aaPredicted RBP4.4□□□□□ -1.71
ATM-202ENST00000419286 NIPAL4Q0D2K0 466 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 CSTF3Q12996 717 aaKnown RBP4.4□□□□□ -1.71
ATM-202ENST00000419286 STK4Q13043 487 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 GALNT3Q14435 633 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 PSMD6Q15008 389 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 UBAP2Q5T6F2 1119 aaKnown RBP4.4□□□□□ -1.71
ATM-202ENST00000419286 KLHL35Q6PF15 583 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 CPLX2Q6PUV4 134 aaKnown RBP4.4□□□□□ -1.71
ATM-202ENST00000419286 FAM83HQ6ZRV2 1179 aaPredicted RBP4.4□□□□□ -1.71
ATM-202ENST00000419286 IGFN1Q86VF2 1251 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 FAR1Q8WVX9 515 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 SGCDQ92629 289 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 CMTM3Q96MX0 182 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 ASB2Q96Q27 587 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 FCRL5Q96RD9 977 aa4.4□□□□□ -1.71
ATM-202ENST00000419286 LBHD1Q9BQE6 289 aaPredicted RBP4.4□□□□□ -1.71
ATM-202ENST00000419286 SLF1Q9BQI6 1058 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms