RNA–Protein interactions for RNA: ENST00000419286.2

ATM-202, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-202ENST00000419286 AEBP2Q6ZN18 517 aaPredicted RBP21.48■■□□□ 1.03
ATM-202ENST00000419286 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
ATM-202ENST00000419286 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
ATM-202ENST00000419286 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
ATM-202ENST00000419286 FOXD1Q16676 465 aa16.93■□□□□ 0.3
ATM-202ENST00000419286 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
ATM-202ENST00000419286 PPP6R1Q9UPN7 881 aa16.25■□□□□ 0.19
ATM-202ENST00000419286 ADRA2BP18089 450 aa16.22■□□□□ 0.19
ATM-202ENST00000419286 PIAS4Q8N2W9 510 aaPredicted RBP15.9■□□□□ 0.14
ATM-202ENST00000419286 MSH5O43196 834 aa15.57■□□□□ 0.08
ATM-202ENST00000419286 PPP4R3CPQ6ZMV5 832 aa14.88□□□□□ -0.03
ATM-202ENST00000419286 MAPK8IP2Q13387 824 aaPredicted RBP14.76□□□□□ -0.05
ATM-202ENST00000419286 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
ATM-202ENST00000419286 DMRT2Q9Y5R5 561 aa14.5□□□□□ -0.09
ATM-202ENST00000419286 POTEDQ86YR6 584 aa14.48□□□□□ -0.09
ATM-202ENST00000419286 KCNA4P22459 653 aa14.46□□□□□ -0.09
ATM-202ENST00000419286 CNKSR2Q8WXI2 1034 aa14.46□□□□□ -0.09
ATM-202ENST00000419286 NCBP3Q53F19 620 aaKnown RBP14.4□□□□□ -0.1
ATM-202ENST00000419286 NPM3O75607 178 aaKnown RBP14.26□□□□□ -0.13
ATM-202ENST00000419286 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
ATM-202ENST00000419286 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
ATM-202ENST00000419286 DCAF8L1A6NGE4 600 aa13.89□□□□□ -0.19
ATM-202ENST00000419286 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
ATM-202ENST00000419286 SLC4A1APQ9BWU0 796 aaKnown RBP13.72□□□□□ -0.21
ATM-202ENST00000419286 SLC4A2P04920 1241 aa13.51□□□□□ -0.25
ATM-202ENST00000419286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.49□□□□□ -0.25
ATM-202ENST00000419286 RNF39Q9H2S5 420 aa13.37□□□□□ -0.27
ATM-202ENST00000419286 ZBTB22O15209 634 aa13.32□□□□□ -0.28
ATM-202ENST00000419286 U3KPZ7 1027 aaPredicted RBP13.3□□□□□ -0.28
ATM-202ENST00000419286 FOXD4L1Q9NU39 408 aa13.29□□□□□ -0.28
ATM-202ENST00000419286 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
ATM-202ENST00000419286 C1QBPQ07021 282 aaKnown RBP13.17□□□□□ -0.3
ATM-202ENST00000419286 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
ATM-202ENST00000419286 MYCNP04198 464 aaPredicted RBP13.13□□□□□ -0.31
ATM-202ENST00000419286 CACNB1Q02641 598 aaPredicted RBP13.08□□□□□ -0.32
ATM-202ENST00000419286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
ATM-202ENST00000419286 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
ATM-202ENST00000419286 SAMD1Q6SPF0 538 aaPredicted RBP12.99□□□□□ -0.33
ATM-202ENST00000419286 SPINK5Q9NQ38 1064 aaPredicted RBP12.97□□□□□ -0.33
ATM-202ENST00000419286 CAPN15O75808 1086 aa12.88□□□□□ -0.35
ATM-202ENST00000419286 APLP2Q06481 763 aa12.88□□□□□ -0.35
ATM-202ENST00000419286 ATF5Q9Y2D1 282 aaPredicted RBP12.88□□□□□ -0.35
ATM-202ENST00000419286 ATXN8OSP0DMR3 200 aa12.81□□□□□ -0.36
ATM-202ENST00000419286 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
ATM-202ENST00000419286 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
ATM-202ENST00000419286 DSG3P32926 999 aa12.71□□□□□ -0.37
ATM-202ENST00000419286 ABCB7O75027 752 aa12.66□□□□□ -0.38
ATM-202ENST00000419286 POLA2Q14181 598 aa12.59□□□□□ -0.39
ATM-202ENST00000419286 ZBTB12Q9Y330 459 aaPredicted RBP12.3□□□□□ -0.44
ATM-202ENST00000419286 MKRN4PQ13434 485 aaPredicted RBP12.29□□□□□ -0.44
ATM-202ENST00000419286 FBLN2P98095 1184 aa12.24□□□□□ -0.45
ATM-202ENST00000419286 OSCARQ8IYS5 282 aa12.17□□□□□ -0.46
ATM-202ENST00000419286 RBM42Q9BTD8 480 aaKnown RBP12.04□□□□□ -0.48
ATM-202ENST00000419286 SPDYE2BA6NHP3 402 aa12□□□□□ -0.49
ATM-202ENST00000419286 SPDYE6P0CI01 402 aa12□□□□□ -0.49
ATM-202ENST00000419286 SPDYE2Q495Y8 402 aa12□□□□□ -0.49
ATM-202ENST00000419286 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.49
ATM-202ENST00000419286 SPDYE4A6NLX3 237 aa11.93□□□□□ -0.5
ATM-202ENST00000419286 SSUH2Q9Y2M2 353 aa11.92□□□□□ -0.5
ATM-202ENST00000419286 AKT1S1Q96B36 256 aa11.91□□□□□ -0.5
ATM-202ENST00000419286 FKBP8Q14318 412 aa11.88□□□□□ -0.51
ATM-202ENST00000419286 REM2Q8IYK8 340 aaPredicted RBP11.82□□□□□ -0.52
ATM-202ENST00000419286 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
ATM-202ENST00000419286 PROM2Q8N271 834 aa11.73□□□□□ -0.53
ATM-202ENST00000419286 PITPNM1O00562 1244 aa11.69□□□□□ -0.54
ATM-202ENST00000419286 SPDYE1Q8NFV5 336 aaPredicted RBP11.65□□□□□ -0.54
ATM-202ENST00000419286 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
ATM-202ENST00000419286 CHRDL2Q6WN34 429 aa11.62□□□□□ -0.55
ATM-202ENST00000419286 STAG3Q9UJ98 1225 aa11.54□□□□□ -0.56
ATM-202ENST00000419286 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
ATM-202ENST00000419286 FXR2P51116 673 aaKnown RBP eCLIP11.49□□□□□ -0.57
ATM-202ENST00000419286 PIP4P2Q8N4L2 257 aa11.48□□□□□ -0.57
ATM-202ENST00000419286 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
ATM-202ENST00000419286 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
ATM-202ENST00000419286 PRKAR2AP13861 404 aaKnown RBP11.39□□□□□ -0.59
ATM-202ENST00000419286 CREBZFQ9NS37 354 aa11.38□□□□□ -0.59
ATM-202ENST00000419286 POTEHQ6S545 545 aa11.36□□□□□ -0.59
ATM-202ENST00000419286 MIER1Q8N108 512 aa11.32□□□□□ -0.6
ATM-202ENST00000419286 VASPP50552 380 aaPredicted RBP11.31□□□□□ -0.6
ATM-202ENST00000419286 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
ATM-202ENST00000419286 MNX1P50219 401 aaPredicted RBP11.26□□□□□ -0.61
ATM-202ENST00000419286 FARP1Q9Y4F1 1045 aaPredicted RBP11.25□□□□□ -0.61
ATM-202ENST00000419286 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
ATM-202ENST00000419286 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
ATM-202ENST00000419286 NPM1P06748 294 aaKnown RBP eCLIP11.13□□□□□ -0.63
ATM-202ENST00000419286 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
ATM-202ENST00000419286 HAX1O00165 279 aa11.12□□□□□ -0.63
ATM-202ENST00000419286 ZBTB47Q9UFB7 747 aaPredicted RBP11.11□□□□□ -0.63
ATM-202ENST00000419286 C19orf67A6NJJ6 358 aa11.1□□□□□ -0.63
ATM-202ENST00000419286 EVX2Q03828 476 aa11.09□□□□□ -0.63
ATM-202ENST00000419286 NUBP1P53384 320 aa11.07□□□□□ -0.64
ATM-202ENST00000419286 CD44P16070 742 aaKnown RBP11.05□□□□□ -0.64
ATM-202ENST00000419286 RASEFQ8IZ41 740 aa11.04□□□□□ -0.64
ATM-202ENST00000419286 SPOCK2Q92563 424 aa11.02□□□□□ -0.65
ATM-202ENST00000419286 TSPYL2Q9H2G4 693 aaPredicted RBP11□□□□□ -0.65
ATM-202ENST00000419286 ZRANB1Q9UGI0 708 aa10.98□□□□□ -0.65
ATM-202ENST00000419286 PAK3O75914 559 aaPredicted RBP10.94□□□□□ -0.66
ATM-202ENST00000419286 DCAF8Q5TAQ9 597 aa10.93□□□□□ -0.66
ATM-202ENST00000419286 FAM212AQ96EL1 285 aa10.93□□□□□ -0.66
ATM-202ENST00000419286 CCDC61Q9Y6R9 512 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms