RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 ARRDC3Q96B67 414 aa12.67□□□□□ -0.38
SKA1-203ENST00000417656 HSPA12BQ96MM6 686 aa12.67□□□□□ -0.38
SKA1-203ENST00000417656 ZNF599Q96NL3 588 aa12.67□□□□□ -0.38
SKA1-203ENST00000417656 OMDQ99983 421 aa12.67□□□□□ -0.38
SKA1-203ENST00000417656 GPR174Q9BXC1 333 aa12.67□□□□□ -0.38
SKA1-203ENST00000417656 MAK16Q9BXY0 300 aaKnown RBP12.67□□□□□ -0.38
SKA1-203ENST00000417656 NCDNQ9UBB6 729 aa12.67□□□□□ -0.38
SKA1-203ENST00000417656 EVLQ9UI08 416 aaPredicted RBP12.67□□□□□ -0.38
SKA1-203ENST00000417656 GMEB2Q9UKD1 530 aa12.67□□□□□ -0.38
SKA1-203ENST00000417656 FZD4Q9ULV1 537 aa12.67□□□□□ -0.38
SKA1-203ENST00000417656 NCKAP1Q9Y2A7 1128 aa12.67□□□□□ -0.38
SKA1-203ENST00000417656 HEY1Q9Y5J3 304 aa12.67□□□□□ -0.38
SKA1-203ENST00000417656 GPR179Q6PRD1 2367 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 MUSKO15146 869 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 CST8O60676 142 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 GJB3O75712 270 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 EPN2O95208 641 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 SEMA4FO95754 770 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 UGT2B4P06133 528 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 PECAM1P16284 738 aaPredicted RBP12.66□□□□□ -0.38
SKA1-203ENST00000417656 ZFXP17010 805 aaPredicted RBP12.66□□□□□ -0.38
SKA1-203ENST00000417656 PTGER3P43115 390 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 PEX5P50542 639 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 ADPRHP54922 357 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 RWDD2BP57060 319 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 ADCY2Q08462 1091 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 CNTN1Q12860 1018 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 TFDP2Q14188 446 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 ZNF235Q14590 738 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 RFTN1Q14699 578 aaPredicted RBP12.66□□□□□ -0.38
SKA1-203ENST00000417656 PPP2R5EQ16537 467 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 AGBL4Q5VU57 503 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 LYSMD4Q5XG99 296 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 AADACL2Q6P093 401 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 ZNF662Q6ZS27 426 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 CYP2U1Q7Z449 544 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 SLC41A1Q8IVJ1 513 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 PLPP6Q8IY26 295 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 TSEN2Q8NCE0 465 aaKnown RBP12.66□□□□□ -0.38
SKA1-203ENST00000417656 TMIEQ8NEW7 156 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 VOPP1Q96AW1 172 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 HAUS1Q96CS2 278 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 HDAC11Q96DB2 347 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 ZNF419Q96HQ0 510 aaPredicted RBP12.66□□□□□ -0.38
SKA1-203ENST00000417656 OLFM3Q96PB7 478 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 HINFPQ9BQA5 517 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 HERPUD2Q9BSE4 406 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 BTBD1Q9H0C5 482 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 NEUROG2Q9H2A3 272 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 SEPT3Q9UH03 358 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 MYO15AQ9UKN7 3530 aa12.66□□□□□ -0.38
SKA1-203ENST00000417656 FAM47DPA6NHR8 397 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 MEI4A8MW99 385 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 MIF4GDA9UHW6 222 aaKnown RBP12.65□□□□□ -0.38
SKA1-203ENST00000417656 DDX3YO15523 660 aaKnown RBP12.65□□□□□ -0.38
SKA1-203ENST00000417656 PIGNO95427 931 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 MX2P20592 715 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 ITGB7P26010 798 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 MMP13P45452 471 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 CREB5Q02930 508 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 SFSWAPQ12872 951 aaKnown RBP12.65□□□□□ -0.38
SKA1-203ENST00000417656 ZNF211Q13398 564 aaPredicted RBP12.65□□□□□ -0.38
SKA1-203ENST00000417656 MYLK3Q32MK0 819 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 PIP5KL1Q5T9C9 394 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 DCAF12L1Q5VU92 463 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 TIGD7Q6NT04 549 aaPredicted RBP12.65□□□□□ -0.38
SKA1-203ENST00000417656 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.65□□□□□ -0.38
SKA1-203ENST00000417656 PARS2Q7L3T8 475 aaKnown RBP12.65□□□□□ -0.38
SKA1-203ENST00000417656 LRRC49Q8IUZ0 686 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 PGBD5Q8N414 524 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 UBL4BQ8N7F7 174 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 NSMCE1Q8WV22 266 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 FAM131CQ96AQ9 280 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 PPP1R16AQ96I34 528 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 ALS2CR12Q96Q35 445 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 PSKH2Q96QS6 385 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 LGMNQ99538 433 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 HEMGNQ9BXL5 484 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 C6orf106Q9H6K1 298 aaPredicted RBP12.65□□□□□ -0.38
SKA1-203ENST00000417656 SGK2Q9HBY8 427 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 DYRK4Q9NR20 520 aa12.65□□□□□ -0.38
SKA1-203ENST00000417656 SAE1Q9UBE0 346 aaPredicted RBP12.65□□□□□ -0.38
SKA1-203ENST00000417656 OTOGLQ3ZCN5 2332 aa12.65□□□□□ -0.39
SKA1-203ENST00000417656 TTC24A2A3L6 582 aaPredicted RBP12.64□□□□□ -0.39
SKA1-203ENST00000417656 PLRG1O43660 514 aaKnown RBP12.64□□□□□ -0.39
SKA1-203ENST00000417656 POP4O95707 220 aaKnown RBP12.64□□□□□ -0.39
SKA1-203ENST00000417656 RETP07949 1114 aa12.64□□□□□ -0.39
SKA1-203ENST00000417656 PYGMP11217 842 aa12.64□□□□□ -0.39
SKA1-203ENST00000417656 TGM2P21980 687 aa12.64□□□□□ -0.39
SKA1-203ENST00000417656 PTPN7P35236 360 aa12.64□□□□□ -0.39
SKA1-203ENST00000417656 MPLP40238 635 aa12.64□□□□□ -0.39
SKA1-203ENST00000417656 NEK3P51956 506 aa12.64□□□□□ -0.39
SKA1-203ENST00000417656 COPS2P61201 443 aa12.64□□□□□ -0.39
SKA1-203ENST00000417656 MAXP61244 160 aa12.64□□□□□ -0.39
SKA1-203ENST00000417656 RAD51Q06609 339 aa12.64□□□□□ -0.39
SKA1-203ENST00000417656 ZNF33AQ06730 810 aa12.64□□□□□ -0.39
SKA1-203ENST00000417656 PPIDQ08752 370 aaKnown RBP12.64□□□□□ -0.39
SKA1-203ENST00000417656 CCDC173Q0VFZ6 552 aa12.64□□□□□ -0.39
SKA1-203ENST00000417656 CCDC6Q16204 474 aa12.64□□□□□ -0.39
SKA1-203ENST00000417656 MARC1Q5VT66 337 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms