RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 CTSKP43235 329 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 GRIA4P48058 902 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 PAPOLAP51003 745 aaKnown RBP10.39□□□□□ -0.75
HDLBP-206ENST00000417540 ATXN3P54252 364 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-206ENST00000417540 CLDN6P56747 220 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 CLDN2P57739 230 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 MAPK8IP2Q13387 824 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-206ENST00000417540 TRIM14Q14142 442 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 CYTH1Q15438 398 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 DPYSL2Q16555 572 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 SLC18A3Q16572 532 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 HLA-BQ31612 363 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 ERMARDQ5T6L9 678 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 SARM1Q6SZW1 724 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 PIP4P1Q86T03 277 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 NAXDQ8IW45 347 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 SLC22A18ASQ8N1D0 253 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 NIPA2Q8N8Q9 360 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 TC2NQ8N9U0 490 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 CEP76Q8TAP6 659 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 TSC1Q92574 1164 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 CEP44Q9C0F1 390 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 MAGEH1Q9H213 219 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 GAREM1Q9H706 876 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 AASDHPPTQ9NRN7 309 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 DNAAF2Q9NVR5 837 aaKnown RBP10.39□□□□□ -0.75
HDLBP-206ENST00000417540 HECAQ9UBI9 543 aaPredicted RBP10.39□□□□□ -0.75
HDLBP-206ENST00000417540 SUSD2Q9UGT4 822 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 NCKAP1Q9Y2A7 1128 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 ANKRD6Q9Y2G4 727 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 CABIN1Q9Y6J0 2220 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 IGF2RP11717 2491 aa10.39□□□□□ -0.75
HDLBP-206ENST00000417540 A0A0U1RQJ8 604 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 LRRC72A6NJI9 287 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 KRIT1O00522 736 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 PRAMEF11O60813 436 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 OPHN1O60890 802 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 SDC3O75056 442 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 GSRP00390 522 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 GNSP15586 552 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 PMLP29590 882 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 ARSEP51690 589 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 AFF3P51826 1226 aaKnown RBP10.38□□□□□ -0.75
HDLBP-206ENST00000417540 NEK3P51956 506 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 RHOAP61586 193 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 FOXC1Q12948 553 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 E2F5Q15329 346 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 ZNF284Q2VY69 593 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 PARP15Q460N3 678 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 CARD16Q5EG05 197 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 NCBP2-AS2Q69YL0 99 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 RETSATQ6NUM9 610 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 ERN2Q76MJ5 926 aaKnown RBP10.38□□□□□ -0.75
HDLBP-206ENST00000417540 POLNQ7Z5Q5 900 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 ADAT2Q7Z6V5 191 aaKnown RBP10.38□□□□□ -0.75
HDLBP-206ENST00000417540 DSG4Q86SJ6 1040 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 SPATS2Q86XZ4 545 aaKnown RBP10.38□□□□□ -0.75
HDLBP-206ENST00000417540 MARCH9Q86YJ5 346 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 GATAD2AQ86YP4 633 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 UMODL1-AS1Q8N2C9 162 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 PGBD5Q8N414 524 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 OR2AP1Q8NGE2 309 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 SERAC1Q96JX3 654 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 KLHL32Q96NJ5 620 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 CATSPERBQ9H7T0 1116 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 CTTNBP2NLQ9P2B4 639 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 UBA2Q9UBT2 640 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-206ENST00000417540 SCML1Q9UN30 329 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 COQ6Q9Y2Z9 468 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.38□□□□□ -0.751e-10■■□□□ 12.5
HDLBP-206ENST00000417540 FADS3Q9Y5Q0 445 aa10.38□□□□□ -0.75
HDLBP-206ENST00000417540 PCNX2A6NKB5 2137 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 ARID1BQ8NFD5 2236 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TBC1D3DA0A087WVF3 549 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TBC1D3IA0A087WXS9 549 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TBC1D3EA0A087X179 549 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TBC1D3KA0A087X1G2 549 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TBC1D3FA6NER0 549 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-206ENST00000417540 SOWAHDA6NJG2 315 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TBC1D3LB9A6J9 549 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 SLC31A1O15431 190 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 IGSF6O95976 241 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 PEX11BO96011 259 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 PRNPP04156 253 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TBC1D3HP0C7X1 549 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 PCK1P35558 622 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 IGFALSP35858 605 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 SSR1P43307 286 aaKnown RBP10.37□□□□□ -0.75
HDLBP-206ENST00000417540 MARCKSL1P49006 195 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 CCT8P50990 548 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 ZNF75DP51815 510 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 AIF1P55008 147 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 CDH6P55285 790 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 NXPH1P58417 271 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 MAXP61244 160 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 DPYSL3Q14195 570 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 PTPRRQ15256 657 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TMEM259Q4ZIN3 620 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 KCTD16Q68DU8 428 aa10.37□□□□□ -0.75
HDLBP-206ENST00000417540 TBC1D3GQ6DHY5 549 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms