RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 TRABD2BA6NFA1 517 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 CKMT2P17540 419 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 YBEYP58557 167 aaPredicted RBP25.76■■□□□ 1.71
VEGFA-208ENST00000417285 MYLK3Q32MK0 819 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 SCYL2Q6P3W7 929 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 DCUN1D2Q6PH85 259 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 MCOLN2Q8IZK6 566 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 CASKIN2Q8WXE0 1202 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 IFT43Q96FT9 208 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 OSBPL1AQ9BXW6 950 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 ZDHHC6Q9H6R6 413 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 DONSONQ9NYP3 566 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 NEU3Q9UQ49 428 aa25.76■■□□□ 1.71
VEGFA-208ENST00000417285 NBEAQ8NFP9 2946 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 COL5A1P20908 1838 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-208ENST00000417285 A0A1B0GTH6 734 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 LRRC53A6NM62 1247 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 CCP110O43303 1012 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 TSPAN6O43657 245 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 EPHB2P29323 1055 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 HNF1BP35680 557 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 DNAJC3Q13217 504 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 SGCGQ13326 291 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 ZNF211Q13398 564 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-208ENST00000417285 CAMK2BQ13554 666 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 ASIC2Q16515 512 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 ZNF805Q5CZA5 627 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 SEL1L3Q68CR1 1132 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 ABI3BPQ7Z7G0 1075 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 RTL3Q8N8U3 475 aaKnown RBP25.75■■□□□ 1.71
VEGFA-208ENST00000417285 OR2AP1Q8NGE2 309 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 EPAS1Q99814 870 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 FUCA2Q9BTY2 467 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 TM6SF2Q9BZW4 377 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 ACTL7AQ9Y615 435 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 WDFY3Q8IZQ1 3526 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 PLXNB3Q9ULL4 1909 aa25.75■■□□□ 1.71
VEGFA-208ENST00000417285 APC2O95996 2303 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 C16orf96A6NNT2 1141 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 BUB1O43683 1085 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 SERPINC1P01008 464 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 JUPP14923 745 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 ACADVLP49748 655 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 TPM4P67936 248 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 RAD51Q06609 339 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 IQCB1Q15051 598 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 KLHL40Q2TBA0 621 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 HS1BP3Q53T59 392 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 INO80DQ53TQ3 878 aaPredicted RBP25.74■■□□□ 1.71
VEGFA-208ENST00000417285 PPP1R15BQ5SWA1 713 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 ASB12Q8WXK4 309 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 ARHGEF26Q96DR7 871 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 LENG8Q96PV6 779 aaPredicted RBP25.74■■□□□ 1.71
VEGFA-208ENST00000417285 MYOCQ99972 504 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 SYT11Q9BT88 431 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 CATSPERBQ9H7T0 1116 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 FZD10Q9ULW2 581 aa25.74■■□□□ 1.71
VEGFA-208ENST00000417285 PTPRBP23467 1997 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 FAM149AA5PLN7 773 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 A6NNZ2 444 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 KRIT1O00522 736 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 PAK4O96013 591 aaPredicted RBP25.73■■□□□ 1.71
VEGFA-208ENST00000417285 DGKAP23743 735 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 HTR7P34969 479 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 RPL7AP62424 266 aaKnown RBP25.73■■□□□ 1.71
VEGFA-208ENST00000417285 MAPK8IP2Q13387 824 aaPredicted RBP25.73■■□□□ 1.71
VEGFA-208ENST00000417285 Q6ZSR6 202 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 PARS2Q7L3T8 475 aaKnown RBP25.73■■□□□ 1.71
VEGFA-208ENST00000417285 PYROXD2Q8N2H3 581 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 SLC25A45Q8N413 288 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 OR13H1Q8NG92 308 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 MDM1Q8TC05 714 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 C1QTNF2Q9BXJ5 285 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 CALN1Q9BXU9 219 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 FZD3Q9NPG1 666 aa25.73■■□□□ 1.71
VEGFA-208ENST00000417285 WASH4PA8MWX3 477 aa25.72■■□□□ 1.71
VEGFA-208ENST00000417285 NEMP1O14524 444 aa25.72■■□□□ 1.71
VEGFA-208ENST00000417285 CLDN2P57739 230 aa25.72■■□□□ 1.71
VEGFA-208ENST00000417285 PARP15Q460N3 678 aa25.72■■□□□ 1.71
VEGFA-208ENST00000417285 GCNT7Q6ZNI0 430 aa25.72■■□□□ 1.71
VEGFA-208ENST00000417285 ZNF354CQ86Y25 554 aa25.72■■□□□ 1.71
VEGFA-208ENST00000417285 NAP1L5Q96NT1 182 aaPredicted RBP25.72■■□□□ 1.71
VEGFA-208ENST00000417285 EDEM3Q9BZQ6 932 aa25.72■■□□□ 1.71
VEGFA-208ENST00000417285 PARVAQ9NVD7 372 aa25.72■■□□□ 1.71
VEGFA-208ENST00000417285 TAS2R14Q9NYV8 317 aa25.72■■□□□ 1.71
VEGFA-208ENST00000417285 AIPL1Q9NZN9 384 aa25.72■■□□□ 1.71
VEGFA-208ENST00000417285 SYCE3A1L190 88 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 NEMP2A6NFY4 417 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 TMCO5BA8MYB1 307 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 FGF10O15520 208 aaPredicted RBP25.71■■□□□ 1.71
VEGFA-208ENST00000417285 SDC3O75056 442 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 ACP1P24666 158 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 CYP4F3Q08477 520 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 PROX2Q3B8N5 592 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 MARCH9Q86YJ5 346 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 CACTIN-AS1Q8N1I8 211 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 UMODL1-AS1Q8N2C9 162 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 BMFQ96LC9 184 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 GDAP1L1Q96MZ0 367 aa25.71■■□□□ 1.71
VEGFA-208ENST00000417285 TTYH3Q9C0H2 523 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms