RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CCNYQ8ND76 341 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 RUBCNQ92622 972 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 ZNF419Q96HQ0 510 aaPredicted RBP23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 TSGA13Q96PP4 275 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 ALS2CR12Q96Q35 445 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 DTLQ9NZJ0 730 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 LHX3Q9UBR4 397 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 PCDHGA5Q9Y5G8 931 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 WASF2Q9Y6W5 498 aa23.44■■□□□ 1.34
SMARCB1-205ENST00000417137 CST8O60676 142 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 FTCDO95954 541 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 DPP6P42658 865 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 DYNLT1P63172 113 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 ZNF235Q14590 738 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 PDK1Q15118 436 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 SYCP2LQ5T4T6 812 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 ASCL5Q7RTU5 278 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 FATE1Q969F0 183 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 PSKH2Q96QS6 385 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 HINFPQ9BQA5 517 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 CPEB1Q9BZB8 566 aaKnown RBP23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 BRD8Q9H0E9 1235 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 EFR3BQ9Y2G0 817 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 CAPN6Q9Y6Q1 641 aa23.43■■□□□ 1.34
SMARCB1-205ENST00000417137 hCG_1818297A0A087WSY0 165 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 LRRC72A6NJI9 287 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 MATN3O15232 486 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 SEMA4FO95754 770 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 KRT10P13645 584 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 TGM2P21980 687 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 ACSL1P33121 698 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 MAPK8P45983 427 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 ZNF33AQ06730 810 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 SLC10A7Q0GE19 358 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 SLC10A2Q12908 348 aaPredicted RBP23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 HNRNPDQ14103 355 aaKnown RBP23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 POM121L1PQ3SYA9 428 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 LYSMD4Q5XG99 296 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 TSEN2Q8NCE0 465 aaKnown RBP23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 OR6K2Q8NGY2 324 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 HDAC11Q96DB2 347 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 HDAC8Q9BY41 377 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 KDM4CQ9H3R0 1056 aa23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 EVLQ9UI08 416 aaPredicted RBP23.42■■□□□ 1.34
SMARCB1-205ENST00000417137 PPP1R12AO14974 1030 aaPredicted RBP23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 ZSCAN12O43309 604 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 NEBLO76041 1014 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 EPN2O95208 641 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 MAP3K6O95382 1288 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 PEX11BO96011 259 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 ITGB7P26010 798 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 DRD3P35462 400 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 MMP13P45452 471 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 CNTN1Q12860 1018 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 ZNF805Q5CZA5 627 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 WDR45BQ5MNZ6 344 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 GDPD4Q6W3E5 623 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 ERN2Q76MJ5 926 aaKnown RBP23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 SRLQ86TD4 932 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 DEFB119Q8N690 84 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 OR14C36Q8NHC7 312 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 P3H4Q92791 437 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 TUBGCP5Q96RT8 1024 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 SERGEFQ9UGK8 458 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 NUP205Q92621 2012 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 CFAP54Q96N23 3096 aa23.41■■□□□ 1.34
SMARCB1-205ENST00000417137 METTL12A8MUP2 240 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 PTPN7P35236 360 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 METAP1P53582 386 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 CREB5Q02930 508 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 CCDC173Q0VFZ6 552 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 CCDC181Q5TID7 509 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 FBXL19Q6PCT2 694 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 CYP2U1Q7Z449 544 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 CCDC13Q8IYE1 715 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 TRIM58Q8NG06 486 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 OR2T34Q8NGX1 318 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 ALG3Q92685 438 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 FAM131CQ96AQ9 280 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 ARRDC3Q96B67 414 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 HES6Q96HZ4 224 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 EXOC2Q96KP1 924 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 HSPA12BQ96MM6 686 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 AMACRQ9UHK6 382 aa23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 TPX2Q9ULW0 747 aaKnown RBP23.4■■□□□ 1.34
SMARCB1-205ENST00000417137 BCLAF3A2AJT9 711 aaKnown RBP23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 FAM47DPA6NHR8 397 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 MEI4A8MW99 385 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 UGT2B4P06133 528 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 CCNB1P14635 433 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 GKP32189 559 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 PTGER3P43115 390 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 SCNN1BP51168 640 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 NEK3P51956 506 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 AP1S1P61966 158 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 PPIDQ08752 370 aaKnown RBP23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 LLGL1Q15334 1064 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 RALGPS1Q5JS13 557 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 NPNTQ6UXI9 565 aa23.39■■□□□ 1.33
SMARCB1-205ENST00000417137 BBS12Q6ZW61 710 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms