RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 C16orf96A6NNT2 1141 aa15.07■□□□□ 0
RPS28-201ENST00000417088 FAM72CH0Y354 149 aa15.07■□□□□ 0
RPS28-201ENST00000417088 TSPAN6O43657 245 aa15.07■□□□□ 0
RPS28-201ENST00000417088 CYP1A1P04798 512 aaPredicted RBP15.07■□□□□ 0
RPS28-201ENST00000417088 GP1BAP07359 652 aa15.07■□□□□ 0
RPS28-201ENST00000417088 NME1P15531 152 aaKnown RBP15.07■□□□□ 0
RPS28-201ENST00000417088 RHOQP17081 205 aa15.07■□□□□ 0
RPS28-201ENST00000417088 CHRNB2P17787 502 aa15.07■□□□□ 0
RPS28-201ENST00000417088 MMP8P22894 467 aa15.07■□□□□ 0
RPS28-201ENST00000417088 ETFBP38117 255 aa15.07■□□□□ 0
RPS28-201ENST00000417088 RABIFP47224 123 aa15.07■□□□□ 0
RPS28-201ENST00000417088 CCDC173Q0VFZ6 552 aa15.07■□□□□ 0
RPS28-201ENST00000417088 SGCGQ13326 291 aa15.07■□□□□ 0
RPS28-201ENST00000417088 CDO1Q16878 200 aa15.07■□□□□ 0
RPS28-201ENST00000417088 TCP11X2Q5H9J9 407 aa15.07■□□□□ 0
RPS28-201ENST00000417088 TPRG1LQ5T0D9 272 aa15.07■□□□□ 0
RPS28-201ENST00000417088 FAM72AQ5TYM5 149 aa15.07■□□□□ 0
RPS28-201ENST00000417088 FAM72DQ6L9T8 149 aa15.07■□□□□ 0
RPS28-201ENST00000417088 RWDD4Q6NW29 188 aaKnown RBP15.07■□□□□ 0
RPS28-201ENST00000417088 PHLDB2Q86SQ0 1253 aa15.07■□□□□ 0
RPS28-201ENST00000417088 ZSCAN30Q86W11 494 aa15.07■□□□□ 0
RPS28-201ENST00000417088 NLRP14Q86W24 1093 aa15.07■□□□□ 0
RPS28-201ENST00000417088 FAM72BQ86X60 149 aa15.07■□□□□ 0
RPS28-201ENST00000417088 ZNF677Q86XU0 584 aa15.07■□□□□ 0
RPS28-201ENST00000417088 ZNF548Q8NEK5 533 aaPredicted RBP15.07■□□□□ 0
RPS28-201ENST00000417088 OR6K2Q8NGY2 324 aa15.07■□□□□ 0
RPS28-201ENST00000417088 JOSD2Q8TAC2 188 aa15.07■□□□□ 0
RPS28-201ENST00000417088 DUSP23Q9BVJ7 150 aa15.07■□□□□ 0
RPS28-201ENST00000417088 OSBPL2Q9H1P3 480 aa15.07■□□□□ 0
RPS28-201ENST00000417088 GANQ9H2C0 597 aa15.07■□□□□ 0
RPS28-201ENST00000417088 TMEM248Q9NWD8 314 aa15.07■□□□□ 0
RPS28-201ENST00000417088 DACH1Q9UI36 760 aa15.07■□□□□ 0
RPS28-201ENST00000417088 DNAI1Q9UI46 699 aa15.07■□□□□ 0
RPS28-201ENST00000417088 KLF15Q9UIH9 416 aa15.07■□□□□ 0
RPS28-201ENST00000417088 NEU3Q9UQ49 428 aa15.07■□□□□ 0
RPS28-201ENST00000417088 SHROOM3Q8TF72 1996 aa15.07■□□□□ 0
RPS28-201ENST00000417088 HELZ2Q9BYK8 2649 aaKnown RBP15.06■□□□□ 0
RPS28-201ENST00000417088 C2CD4BA6NLJ0 364 aa15.06■□□□□ 0
RPS28-201ENST00000417088 FPGTO14772 594 aa15.06■□□□□ 0
RPS28-201ENST00000417088 SPINT1O43278 529 aa15.06■□□□□ 0
RPS28-201ENST00000417088 GFPT2O94808 682 aa15.06■□□□□ 0
RPS28-201ENST00000417088 GJB6O95452 261 aa15.06■□□□□ 0
RPS28-201ENST00000417088 PRB1P04280 392 aa15.06■□□□□ 0
RPS28-201ENST00000417088 MPOP05164 745 aa15.06■□□□□ 0
RPS28-201ENST00000417088 EEF1GP26641 437 aaKnown RBP15.06■□□□□ 0
RPS28-201ENST00000417088 SDC4P31431 198 aa15.06■□□□□ 0
RPS28-201ENST00000417088 MAPKAPK2P49137 400 aa15.06■□□□□ 0
RPS28-201ENST00000417088 DUSP3P51452 185 aaPredicted RBP15.06■□□□□ 0
RPS28-201ENST00000417088 PFN3P60673 137 aa15.06■□□□□ 0
RPS28-201ENST00000417088 FMO1Q01740 532 aa15.06■□□□□ 0
RPS28-201ENST00000417088 CDR2Q01850 454 aa15.06■□□□□ 0
RPS28-201ENST00000417088 TLE3Q04726 772 aa15.06■□□□□ 0
RPS28-201ENST00000417088 PDE1CQ14123 709 aaPredicted RBP15.06■□□□□ 0
RPS28-201ENST00000417088 ARL13BQ3SXY8 428 aa15.06■□□□□ 0
RPS28-201ENST00000417088 ZNF805Q5CZA5 627 aa15.06■□□□□ 0
RPS28-201ENST00000417088 LEKR1Q6ZMV7 388 aa15.06■□□□□ 0
RPS28-201ENST00000417088 PARGQ86W56 976 aa15.06■□□□□ 0
RPS28-201ENST00000417088 RYBPQ8N488 228 aaPredicted RBP15.06■□□□□ 0
RPS28-201ENST00000417088 OR2AP1Q8NGE2 309 aa15.06■□□□□ 0
RPS28-201ENST00000417088 SLC30A5Q8TAD4 765 aa15.06■□□□□ 0
RPS28-201ENST00000417088 GPT2Q8TD30 523 aa15.06■□□□□ 0
RPS28-201ENST00000417088 ASB12Q8WXK4 309 aa15.06■□□□□ 0
RPS28-201ENST00000417088 RAB7BQ96AH8 199 aa15.06■□□□□ 0
RPS28-201ENST00000417088 FCRL3Q96P31 734 aaPredicted RBP15.06■□□□□ 0
RPS28-201ENST00000417088 C11orf70Q9BRQ4 267 aa15.06■□□□□ 0
RPS28-201ENST00000417088 MAGEH1Q9H213 219 aa15.06■□□□□ 0
RPS28-201ENST00000417088 RETREG1Q9H6L5 497 aa15.06■□□□□ 0
RPS28-201ENST00000417088 USP29Q9HBJ7 922 aa15.06■□□□□ 0
RPS28-201ENST00000417088 TAB2Q9NYJ8 693 aa15.06■□□□□ 0
RPS28-201ENST00000417088 IPO11Q9UI26 975 aaKnown RBP15.06■□□□□ 0
RPS28-201ENST00000417088 GGT7Q9UJ14 662 aa15.06■□□□□ 0
RPS28-201ENST00000417088 ITM2BQ9Y287 266 aa15.06■□□□□ 0
RPS28-201ENST00000417088 CSNK1G3Q9Y6M4 447 aa15.06■□□□□ 0
RPS28-201ENST00000417088 H3BM21 787 aa15.05■□□□□ -0
RPS28-201ENST00000417088 KRIT1O00522 736 aa15.05■□□□□ -0
RPS28-201ENST00000417088 ATXN7O15265 892 aaPredicted RBP15.05■□□□□ -0
RPS28-201ENST00000417088 USP12O75317 370 aa15.05■□□□□ -0
RPS28-201ENST00000417088 CSO75390 466 aaKnown RBP15.05■□□□□ -0
RPS28-201ENST00000417088 LRIG2O94898 1065 aa15.05■□□□□ -0
RPS28-201ENST00000417088 GSRP00390 522 aa15.05■□□□□ -0
RPS28-201ENST00000417088 PTPN9P43378 593 aa15.05■□□□□ -0
RPS28-201ENST00000417088 KLK7P49862 253 aa15.05■□□□□ -0
RPS28-201ENST00000417088 GEMIN4P57678 1058 aaKnown RBP15.05■□□□□ -0
RPS28-201ENST00000417088 EIF2B5Q13144 721 aaKnown RBP15.05■□□□□ -0
RPS28-201ENST00000417088 POLD3Q15054 466 aaPredicted RBP15.05■□□□□ -0
RPS28-201ENST00000417088 MYLK3Q32MK0 819 aa15.05■□□□□ -0
RPS28-201ENST00000417088 ZCCHC8Q6NZY4 707 aaKnown RBP15.05■□□□□ -0
RPS28-201ENST00000417088 STRADAQ7RTN6 431 aa15.05■□□□□ -0
RPS28-201ENST00000417088 SPACA3Q8IXA5 215 aa15.05■□□□□ -0
RPS28-201ENST00000417088 DENND6BQ8NEG7 585 aa15.05■□□□□ -0
RPS28-201ENST00000417088 IFI44Q8TCB0 444 aa15.05■□□□□ -0
RPS28-201ENST00000417088 MAPK15Q8TD08 544 aa15.05■□□□□ -0
RPS28-201ENST00000417088 SLC39A7Q92504 469 aa15.05■□□□□ -0
RPS28-201ENST00000417088 CENPIQ92674 756 aaPredicted RBP15.05■□□□□ -0
RPS28-201ENST00000417088 ZNF578Q96N58 590 aaPredicted RBP15.05■□□□□ -0
RPS28-201ENST00000417088 DEPDC7Q96QD5 511 aa15.05■□□□□ -0
RPS28-201ENST00000417088 EVA1BQ9NVM1 165 aa15.05■□□□□ -0
RPS28-201ENST00000417088 CHD5Q8TDI0 1954 aa15.05■□□□□ -0
RPS28-201ENST00000417088 TK2O00142 265 aa15.04■□□□□ -0
RPS28-201ENST00000417088 NEMP1O14524 444 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms