RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 ARL13BQ3SXY8 428 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 NEK5Q6P3R8 708 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 Q6ZSR6 202 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 ABI3BPQ7Z7G0 1075 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 PHLDB2Q86SQ0 1253 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 SLC30A5Q8TAD4 765 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 MED8Q96G25 268 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 ATXN7L3BQ96GX2 97 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 DUSP23Q9BVJ7 150 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 USP29Q9HBJ7 922 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 ADAM22Q9P0K1 906 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 NOCTQ9UK39 431 aaKnown RBP13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 SSUH2Q9Y2M2 353 aa13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 TDRD6O60522 2096 aaKnown RBP13.5□□□□□ -0.25
CTHRC1-202ENST00000415886 MGAQ8IWI9 3026 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 SYCE3A1L190 88 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 NEMP2A6NFY4 417 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 A6NNZ2 444 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 K7ENP7 123 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 EPHB6O15197 1021 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 ARHGAP6O43182 974 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 SNAP91O60641 907 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 SRGAP2O75044 1071 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 CLDN11O75508 207 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 CALB1P05937 261 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 KRT3P12035 628 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 DESP17661 470 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 MMP8P22894 467 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 RRM1P23921 792 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 RBMS1P29558 406 aaKnown RBP13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 SDC4P31431 198 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 CXCR3P49682 368 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 HNRNPKP61978 463 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 SKOR1P84550 965 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 KCNC4Q03721 635 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 SKOR2Q2VWA4 1001 aaPredicted RBP13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 GUSBP11Q6P575 273 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 INO80CQ6PI98 192 aaPredicted RBP13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 IGF2-ASQ6U949 168 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 CRTC1Q6UUV9 634 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 C14orf80Q86SX3 495 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 ATP11CQ8NB49 1132 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 CHST14Q8NCH0 376 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 ZNF548Q8NEK5 533 aaPredicted RBP13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 OR2A12Q8NGT7 310 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 GRIN3AQ8TCU5 1115 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 IFT43Q96FT9 208 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 PRR11Q96HE9 360 aaPredicted RBP13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 SLC46A1Q96NT5 459 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 TBCBQ99426 244 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 PSMB7Q99436 277 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 AGPAT1Q99943 283 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 C11orf70Q9BRQ4 267 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 SELENOOQ9BVL4 669 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 MUC3BQ9H195 1237 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 RTN4Q9NQC3 1192 aaKnown RBP13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 DYRK4Q9NR20 520 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 GPR27Q9NS67 375 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 PIGVQ9NUD9 493 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 EVA1BQ9NVM1 165 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 HS3ST2Q9Y278 367 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 FARP1Q9Y4F1 1045 aaPredicted RBP13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 ENTPD2Q9Y5L3 495 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 HS3ST4Q9Y661 456 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 TENM4Q6N022 2769 aa13.49□□□□□ -0.25
CTHRC1-202ENST00000415886 CPED1A4D0V7 1026 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 POM121BA6NF01 834 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 SMAD6O43541 496 aaKnown RBP13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 ADCY5O95622 1261 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 CHRNB2P17787 502 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 CDH4P55283 916 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 ATP11AP98196 1134 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 FMO1Q01740 532 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 FGL2Q14314 439 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 FZD2Q14332 565 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 TMEM259Q4ZIN3 620 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 ZCCHC8Q6NZY4 707 aaKnown RBP13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 FOXR1Q6PIV2 292 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 ERN2Q76MJ5 926 aaKnown RBP13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 ARCQ7LC44 396 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 EFL1Q7Z2Z2 1120 aaKnown RBP13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 TMIEQ8NEW7 156 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 PGAP3Q96FM1 320 aaPredicted RBP13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 BMFQ96LC9 184 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 C1orf74Q96LT6 269 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 CCDC114Q96M63 670 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 CFAP57Q96MR6 1250 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 TNKS2Q9H2K2 1166 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 METTL5Q9NRN9 209 aaKnown RBP13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 ARHGEF38Q9NXL2 777 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 VPS51Q9UID3 782 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 ATMQ13315 3056 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 CFAP46Q8IYW2 2715 aa13.48□□□□□ -0.25
CTHRC1-202ENST00000415886 CDRT15L2A8MXV6 281 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 CASC3O15234 703 aaKnown RBP13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 RAD51BO15315 384 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 TEX33O43247 280 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 CNTN5O94779 1100 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 WISP1O95388 367 aa13.47□□□□□ -0.25
CTHRC1-202ENST00000415886 CSF2P04141 144 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms