RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 C1QTNF2Q9BXJ5 285 aa16.07■□□□□ 0.16
CPNE1-208ENST00000414711 VPS28Q9UK41 221 aa16.07■□□□□ 0.16
CPNE1-208ENST00000414711 APPL1Q9UKG1 709 aa16.07■□□□□ 0.16
CPNE1-208ENST00000414711 HS3ST2Q9Y278 367 aa16.07■□□□□ 0.16
CPNE1-208ENST00000414711 DAAM1Q9Y4D1 1078 aa16.07■□□□□ 0.16
CPNE1-208ENST00000414711 PCDHGA3Q9Y5H0 932 aa16.07■□□□□ 0.16
CPNE1-208ENST00000414711 FADS3Q9Y5Q0 445 aa16.07■□□□□ 0.16
CPNE1-208ENST00000414711 ADGRG4Q8IZF6 3080 aa16.07■□□□□ 0.16
CPNE1-208ENST00000414711 IGLON5A6NGN9 336 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 TTLL8A6PVC2 850 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 PIK3R2O00459 728 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 RAD1O60671 282 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 SETSIPP0DME0 302 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 SRCP12931 536 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 GCLMP48507 274 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 ARSIQ5FYB1 569 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 CNNM4Q6P4Q7 775 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 SLC9A9Q8IVB4 645 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 UBA3Q8TBC4 463 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 GPN2Q9H9Y4 310 aaPredicted RBP16.06■□□□□ 0.16
CPNE1-208ENST00000414711 SLC39A2Q9NP94 309 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 DONSONQ9NYP3 566 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 DKK3Q9UBP4 350 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 IL36AQ9UHA7 158 aa16.06■□□□□ 0.16
CPNE1-208ENST00000414711 AP1G1O43747 822 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 IGFALSP35858 605 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 BLKP51451 505 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 AMPD3Q01432 767 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 ARHGAP44Q17R89 818 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 CERCAMQ5T4B2 595 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 TCTN3Q6NUS6 607 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 ASB18Q6ZVZ8 466 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 UNC13DQ70J99 1090 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 TAC4Q86UU9 113 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 ZC3H18Q86VM9 953 aaKnown RBP16.05■□□□□ 0.16
CPNE1-208ENST00000414711 GKN2Q86XP6 184 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 ATP11CQ8NB49 1132 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 OR52K2Q8NGK3 314 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 CLEC4CQ8WTT0 213 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 KIAA1143Q96AT1 154 aaPredicted RBP16.05■□□□□ 0.16
CPNE1-208ENST00000414711 BTN2A3PQ96KV6 586 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 HAPLN3Q96S86 360 aa16.05■□□□□ 0.16
CPNE1-208ENST00000414711 CELSR1Q9NYQ6 3014 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 K7ERQ8 282 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 HGSO14964 777 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-208ENST00000414711 LEFTY1O75610 366 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 GABBR2O75899 941 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 MT-CO1P00395 513 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 TRIM49P0CI25 452 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 TRIM49CP0CI26 452 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 FGF3P11487 239 aaPredicted RBP16.04■□□□□ 0.16
CPNE1-208ENST00000414711 CTSEP14091 401 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 GLB1P16278 677 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 RGS7P49802 495 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 VAMP7P51809 220 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 CENPCQ03188 943 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 RABGAP1LQ5R372 815 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 CEP135Q66GS9 1140 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 RCBTB1Q8NDN9 531 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 GPR156Q8NFN8 814 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 TMEM174Q8WUU8 243 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 EDEM3Q9BZQ6 932 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 MMRN2Q9H8L6 949 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 OR51B4Q9Y5P0 310 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 B3GALT1Q9Y5Z6 326 aa16.04■□□□□ 0.16
CPNE1-208ENST00000414711 MKRN2OSH3BPM6 223 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 NR3C1P04150 777 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 FYNP06241 537 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 CD19P15391 556 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 PNLIPP16233 465 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 RRM1P23921 792 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 EIF4A3P38919 411 aaKnown RBP16.03■□□□□ 0.16
CPNE1-208ENST00000414711 HK3P52790 923 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 YPEL5P62699 121 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 PPP3CAQ08209 521 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 E2F4Q16254 413 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 ZC3H12AQ5D1E8 599 aaKnown RBP16.03■□□□□ 0.16
CPNE1-208ENST00000414711 HID1Q8IV36 788 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 CCDC13Q8IYE1 715 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 CCDC112Q8NEF3 446 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 ASB12Q8WXK4 309 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 CENPTQ96BT3 561 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 FAXDC2Q96IV6 333 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 PRMT1Q99873 361 aaKnown RBP16.03■□□□□ 0.16
CPNE1-208ENST00000414711 DDA1Q9BW61 102 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 CUEDC2Q9H467 287 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 RDH14Q9HBH5 336 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 FRMD4BQ9Y2L6 1034 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 WASF2Q9Y6W5 498 aa16.03■□□□□ 0.16
CPNE1-208ENST00000414711 ZNF106Q9H2Y7 1883 aaKnown RBP16.03■□□□□ 0.16
CPNE1-208ENST00000414711 O00370 1275 aa16.02■□□□□ 0.16
CPNE1-208ENST00000414711 TSPAN6O43657 245 aa16.02■□□□□ 0.16
CPNE1-208ENST00000414711 SYT1P21579 422 aa16.02■□□□□ 0.16
CPNE1-208ENST00000414711 COPB1P53618 953 aaKnown RBP16.02■□□□□ 0.16
CPNE1-208ENST00000414711 ATP1A1-AS1Q5TC04 95 aa16.02■□□□□ 0.16
CPNE1-208ENST00000414711 C22orf39Q6P5X5 142 aa16.02■□□□□ 0.16
CPNE1-208ENST00000414711 DPY19L3Q6ZPD9 716 aa16.02■□□□□ 0.16
CPNE1-208ENST00000414711 PARS2Q7L3T8 475 aaKnown RBP16.02■□□□□ 0.16
CPNE1-208ENST00000414711 VPS36Q86VN1 386 aa16.02■□□□□ 0.16
CPNE1-208ENST00000414711 STARD8Q92502 1023 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms