RNA–Protein interactions for RNA: ENST00000413040.6

NUB1-201, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUB1, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-201ENST00000413040 ALOX15P16050 662 aaPredicted RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 XRCC1P18887 633 aaPredicted RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 SLC1A2P43004 574 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 MAGEA12P43365 314 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 HCAR3P49019 387 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 PGFP49763 221 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 GJA9P57773 515 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 RAB10P61026 200 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 MRPS6P82932 125 aaKnown RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 UGP2Q16851 508 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 CNSTQ6PJW8 725 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 LAYNQ6UX15 382 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 BNC2Q6ZN30 1099 aaPredicted RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 GALNT4Q8N4A0 578 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 PCDH20Q8N6Y1 951 aaKnown RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 ZNF483Q8TF39 744 aaPredicted RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 LRGUKQ96M69 825 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 KLHL5Q96PQ7 755 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 KATNAL1Q9BW62 490 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 POMKQ9H5K3 350 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 ARHGEF38Q9NXL2 777 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 PTCH2Q9Y6C5 1203 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 ANXA9O76027 345 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 APOA4P06727 396 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 ODC1P11926 461 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 MTTPP55157 894 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 RBM20Q5T481 1227 aaKnown RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 LRRTM3Q86VH5 581 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 AGO3Q9H9G7 860 aaKnown RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 COPS7BQ9H9Q2 264 aaPredicted RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 FBXO5Q9UKT4 447 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 DTNAQ9Y4J8 743 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 HHLA1C9JL84 531 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 GRID2O43424 1007 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 HLA-DQB2P05538 268 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 SBK3P0C264 359 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 CD52P31358 61 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 PAPOLAP51003 745 aaKnown RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 TAF1CQ15572 869 aaPredicted RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 GSTA3Q16772 222 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 INTS6LQ5JSJ4 861 aaKnown RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 ZNF419Q96HQ0 510 aaPredicted RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 KIFC1Q9BW19 673 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 TRIM4Q9C037 500 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 NT5MQ9NPB1 228 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 ABI2Q9NYB9 513 aaPredicted RBP13.99□□□□□ -0.17
NUB1-201ENST00000413040 PDP2Q9P2J9 529 aa13.99□□□□□ -0.17
NUB1-201ENST00000413040 GPC4O75487 556 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 SLC4A1P02730 911 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 VCLP18206 1134 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 GLDCP23378 1020 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 CD151P48509 253 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 ZNF789Q5FWF6 425 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 FOXB2Q5VYV0 432 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 METTL21CQ5VZV1 264 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 OVOS1Q6IE37 1185 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 C16orf89Q6UX73 402 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 PDSS2Q86YH6 399 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 HEXDCQ8WVB3 486 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 CASP10Q92851 521 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 NR1H4Q96RI1 486 aaPredicted RBP13.98□□□□□ -0.17
NUB1-201ENST00000413040 SYT17Q9BSW7 474 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 RRN3Q9NYV6 651 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 DNAJB4Q9UDY4 337 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 RAD54BQ9Y620 910 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 ZSWIM8A7E2V4 1837 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 ATP6AP2A0A1C7CYW4 349 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 ATP6AP2O75787 350 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 ITGB1P05556 798 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 ETS2P15036 469 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 CCR1P32246 355 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 PPARGP37231 505 aaPredicted RBP13.98□□□□□ -0.17
NUB1-201ENST00000413040 ETFBP38117 255 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 THPOP40225 353 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 IRX1P78414 480 aaPredicted RBP13.98□□□□□ -0.17
NUB1-201ENST00000413040 GEN1Q17RS7 908 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 RAB41Q5JT25 222 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 NEPROQ6NW34 567 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 BHLHA9Q7RTU4 235 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 ST13P4Q8IZP2 240 aaPredicted RBP13.98□□□□□ -0.17
NUB1-201ENST00000413040 ISL2Q96A47 359 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 WDR41Q9HAD4 459 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 NSMCE4AQ9NXX6 385 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 IPO11Q9UI26 975 aaKnown RBP13.98□□□□□ -0.17
NUB1-201ENST00000413040 TRPV2Q9Y5S1 764 aa13.98□□□□□ -0.17
NUB1-201ENST00000413040 CCDC189A1A4V9 331 aa13.97□□□□□ -0.17
NUB1-201ENST00000413040 CCDC160A6NGH7 325 aa13.97□□□□□ -0.17
NUB1-201ENST00000413040 HAS3O00219 553 aa13.97□□□□□ -0.17
NUB1-201ENST00000413040 HMBSP08397 361 aa13.97□□□□□ -0.17
NUB1-201ENST00000413040 PAMP19021 973 aa13.97□□□□□ -0.17
NUB1-201ENST00000413040 HDCP19113 662 aa13.97□□□□□ -0.17
NUB1-201ENST00000413040 ALDH1A3P47895 512 aa13.97□□□□□ -0.17
NUB1-201ENST00000413040 GEMP55040 296 aa13.97□□□□□ -0.17
NUB1-201ENST00000413040 PURAQ00577 322 aaKnown RBP13.97□□□□□ -0.17
NUB1-201ENST00000413040 SPRYD7Q5W111 196 aa13.97□□□□□ -0.17
NUB1-201ENST00000413040 PM20D1Q6GTS8 502 aa13.97□□□□□ -0.17
NUB1-201ENST00000413040 TAF2Q6P1X5 1199 aa13.97□□□□□ -0.17
NUB1-201ENST00000413040 GK5Q6ZS86 529 aa13.97□□□□□ -0.17
NUB1-201ENST00000413040 TRIM67Q6ZTA4 783 aa13.97□□□□□ -0.17
NUB1-201ENST00000413040 C14orf80Q86SX3 495 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms