RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ELOVL4Q9GZR5 314 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 EPC1Q9H2F5 836 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 DPEP3Q9H4B8 488 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 SMYD3Q9H7B4 428 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 TRPC7Q9HCX4 862 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 TDP1Q9NUW8 608 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 GTSE1Q9NYZ3 720 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 UBP1Q9NZI7 540 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 EHD2Q9NZN4 543 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 WHRNQ9P202 907 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 TRAF3IP3Q9Y228 551 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 CCL26Q9Y258 94 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 FRMD4BQ9Y2L6 1034 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 EPN1Q9Y6I3 576 aaPredicted RBP5.53□□□□□ -1.52
LINC00342-201ENST00000412393 FAM169AQ9Y6X4 670 aa5.53□□□□□ -1.52
LINC00342-201ENST00000412393 ATP8B3O60423 1300 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 EP300Q09472 2414 aaPredicted RBP5.52□□□□□ -1.53
LINC00342-201ENST00000412393 C2orf78A6NCI8 922 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 F8VP50 259 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 CLDN5O00501 218 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 MAPK13O15264 365 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 HLA-DRAP01903 254 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 GYPCP04921 128 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 KRT13P13646 458 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 P4HA1P13674 534 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 ARSAP15289 507 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 HDCP19113 662 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 NR2F2P24468 414 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 PSMC2P35998 433 aaKnown RBP5.52□□□□□ -1.53
LINC00342-201ENST00000412393 PIK3CAP42336 1068 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 CXCL12P48061 93 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 SLC6A11P48066 632 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 IFNAR2P48551 515 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 PDE6CP51160 858 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 CCR3P51677 355 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 CACNA2D1P54289 1103 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 ADKP55263 362 aaKnown RBP5.52□□□□□ -1.53
LINC00342-201ENST00000412393 KRT83P78385 493 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 DPTQ07507 201 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 IFRD2Q12894 506 aaPredicted RBP5.52□□□□□ -1.53
LINC00342-201ENST00000412393 ADAM9Q13443 819 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 FOXE3Q13461 319 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 PNOCQ13519 176 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 PPP2R5DQ14738 602 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 MTF1Q14872 753 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 PON2Q15165 354 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 PDGFRLQ15198 375 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 NFIL3Q16649 462 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 DGKKQ5KSL6 1271 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 C1orf220Q5T0J3 134 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 TRIM68Q6AZZ1 485 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 SPOPLQ6IQ16 392 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 FOXR2Q6PJQ5 311 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 C6orf89Q6UWU4 347 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 SCARA5Q6ZMJ2 495 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 MICALCLQ6ZW33 695 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 INTS8Q75QN2 995 aaKnown RBP5.52□□□□□ -1.53
LINC00342-201ENST00000412393 FAM186BQ8IYM0 893 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 ADSSL1Q8N142 457 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 SLC35F6Q8N357 371 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 CPA6Q8N4T0 437 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 ARL14EPQ8N8R7 260 aaPredicted RBP5.52□□□□□ -1.53
LINC00342-201ENST00000412393 B3GALNT2Q8NCR0 500 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 ANKRD20A12PQ8NF67 263 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 OR8K1Q8NGG5 319 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 FAM76AQ8TAV0 307 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 SH3RF2Q8TEC5 729 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 ATRIPQ8WXE1 791 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 TAF4BQ92750 862 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 NKD1Q969G9 470 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 CHFRQ96EP1 664 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 CABS1Q96KC9 395 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 TNIP3Q96KP6 325 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 C8orf48Q96LL4 319 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 WWC2-AS2Q96NR7 200 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 SLITRK1Q96PX8 696 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 SLC22A12Q96S37 553 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 CYP2S1Q96SQ9 504 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 MED10Q9BTT4 135 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 TTLL2Q9BWV7 592 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 FAM126AQ9BYI3 521 aaPredicted RBP5.52□□□□□ -1.53
LINC00342-201ENST00000412393 SDCBP2Q9H190 292 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 EBF3Q9H4W6 596 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 HPS4Q9NQG7 708 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 PRMT8Q9NR22 394 aaPredicted RBP5.52□□□□□ -1.53
LINC00342-201ENST00000412393 RBM12Q9NTZ6 932 aaKnown RBP5.52□□□□□ -1.53
LINC00342-201ENST00000412393 ZSCAN32Q9NX65 697 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 TRPM5Q9NZQ8 1165 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 GCNT4Q9P109 453 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 GULP1Q9UBP9 304 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 RWDD2AQ9UIY3 292 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 CAPN11Q9UMQ6 739 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 PCDHGA2Q9Y5H1 932 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 SAR1BQ9Y6B6 198 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 SDK1Q7Z5N4 2213 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 OTOGLQ3ZCN5 2332 aa5.52□□□□□ -1.53
LINC00342-201ENST00000412393 CEP192Q8TEP8 1941 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 ZNF840PA6NDX5 716 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 CETN3O15182 167 aa5.51□□□□□ -1.53
LINC00342-201ENST00000412393 RASSF9O75901 435 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms