RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 AAGABQ6PD74 315 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 C1orf228Q6PIY5 440 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 IZUMO2Q6UXV1 221 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 USP49Q70CQ1 688 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 ASCL5Q7RTU5 278 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 SFR1Q86XK3 245 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 BBS5Q8N3I7 341 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 LINC01356Q8N9X3 169 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 OR7D4Q8NG98 312 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 NSUN6Q8TEA1 469 aaKnown RBP5.62□□□□□ -1.51
CLK1-202ENST00000409403 SCFD1Q8WVM8 642 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 RGMAQ96B86 450 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 KAZALD1Q96I82 304 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 BTBD9Q96Q07 612 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 FNBP1Q96RU3 617 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 CGRRF1Q99675 332 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 SH3GL1Q99961 368 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 MRPS26Q9BYN8 205 aaKnown RBP5.62□□□□□ -1.51
CLK1-202ENST00000409403 CCDC68Q9H2F9 335 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 BLZF1Q9H2G9 400 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 PPCSQ9HAB8 311 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 LY9Q9HBG7 655 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 PLGRKTQ9HBL7 147 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 KCNK9Q9NPC2 374 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 FAM207AQ9NSI2 230 aaPredicted RBP5.62□□□□□ -1.51
CLK1-202ENST00000409403 ING3Q9NXR8 418 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 EURLQ9NYK6 297 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 HSFX1Q9UBD0 423 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 AMACRQ9UHK6 382 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 LGALS13Q9UHV8 139 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 HAO1Q9UJM8 370 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 AMFRQ9UKV5 643 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 GDAQ9Y2T3 454 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 RNF114Q9Y508 228 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 MYH10P35580 1976 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 MYH2Q9UKX2 1941 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 ANKRD36CQ5JPF3 1778 aa5.62□□□□□ -1.51
CLK1-202ENST00000409403 CHD7Q9P2D1 2997 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 FRMPD4Q14CM0 1322 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 SH3PXD2BA1X283 911 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 TRIM49BA6NDI0 452 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 LAD1O00515 517 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 LSM1O15116 133 aaKnown RBP5.61□□□□□ -1.51
CLK1-202ENST00000409403 GYG2O15488 501 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 MTSS1O43312 755 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 MGEA5O60502 916 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 TLR2O60603 784 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 MAGEC1O60732 1142 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 ENTPD5O75356 428 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 SPAG7O75391 227 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 CSDE1O75534 798 aaKnown RBP5.61□□□□□ -1.51
CLK1-202ENST00000409403 TOX4O94842 621 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 HAUS5O94927 633 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 ESRRBO95718 433 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 GASTP01350 101 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 FTLP02792 175 aaPredicted RBP5.61□□□□□ -1.51
CLK1-202ENST00000409403 HRGP04196 525 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 ATP5BP06576 529 aaKnown RBP5.61□□□□□ -1.51
CLK1-202ENST00000409403 ZCCHC18P0CG32 403 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 ZNF12P17014 697 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 KLRC1P26715 233 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 HTR1BP28222 390 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 CRHR1P34998 444 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 PHBP35232 272 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 HALP42357 657 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 RFX5P48382 616 aaPredicted RBP5.61□□□□□ -1.51
CLK1-202ENST00000409403 DNA2P51530 1060 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 RAP1GDS1P52306 607 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 CHN2P52757 468 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 IFI35P80217 286 aaPredicted RBP5.61□□□□□ -1.51
CLK1-202ENST00000409403 CAV1Q03135 178 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 KLHL30Q0D2K2 578 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 TCF15Q12870 199 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 MAPK7Q13164 816 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 SPARCL1Q14515 664 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 SLC29A2Q14542 456 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 LPIN1Q14693 890 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 LLGL1Q15334 1064 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 TRADDQ15628 312 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 ALX1Q15699 326 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 KYNUQ16719 465 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 DNAL1Q4LDG9 190 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 PACS1Q6VY07 963 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 USP30Q70CQ3 517 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 NET1Q7Z628 596 aaPredicted RBP5.61□□□□□ -1.51
CLK1-202ENST00000409403 LRRC49Q8IUZ0 686 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 TMEM151BQ8IW70 566 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 PQLC1Q8N2U9 271 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 ANKRD13CQ8N6S4 541 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 LRRC57Q8N9N7 239 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 ESR2Q92731 530 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 EFHD2Q96C19 240 aaPredicted RBP5.61□□□□□ -1.51
CLK1-202ENST00000409403 TTC25Q96NG3 672 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 BIRC8Q96P09 236 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 PDCD2LQ9BRP1 358 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 AP1M1Q9BXS5 423 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 DRC3Q9H069 523 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.61□□□□□ -1.51
CLK1-202ENST00000409403 ZNF700Q9H0M5 742 aa5.61□□□□□ -1.51
CLK1-202ENST00000409403 TCP11L1Q9NUJ3 509 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms