RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 TMPRSS4Q9NRS4 437 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 IGSF5Q9NSI5 407 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 UCKL1Q9NWZ5 548 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 ZFR2Q9UPR6 939 aaKnown RBP9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 HS3ST3A1Q9Y663 406 aa9.36□□□□□ -0.91
NIF3L1-203ENST00000409129 BHMG1C9JSJ3 638 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 FFAR2O15552 330 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 ZNF821O75541 412 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 LEFTY1O75610 366 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 ZMPSTE24O75844 475 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 PIAS2O75928 621 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 ENDOD1O94919 500 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 GIMD1P0DJR0 217 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 ALPPL2P10696 532 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 CKMT1AP12532 417 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 CYP11B1P15538 503 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 ACTN2P35609 894 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 CLDN2P57739 230 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 LSM11P83369 360 aaKnown RBP eCLIP9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 NFKB2Q00653 900 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 CACNA1DQ01668 2161 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 NOTCH2Q04721 2471 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 RAPGEF1Q13905 1077 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 DRAP1Q14919 205 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 TMEM259Q4ZIN3 620 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 VWA3BQ502W6 1294 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 FAM102AQ5T9C2 384 aaPredicted RBP9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 SEL1L3Q68CR1 1132 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 RETSATQ6NUM9 610 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 KDM7AQ6ZMT4 941 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 GCNT7Q6ZNI0 430 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 DPY19L3Q6ZPD9 716 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 Q6ZSR6 202 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 TMC6Q7Z403 805 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 ABI3BPQ7Z7G0 1075 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 DCP2Q8IU60 420 aaKnown RBP9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 FAM114A1Q8IWE2 563 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 OR7D4Q8NG98 312 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 GRIN3AQ8TCU5 1115 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 FEM1CQ96JP0 617 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 BMFQ96LC9 184 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 LGMNQ99538 433 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 HEPHQ9BQS7 1158 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 SLC17A9Q9BYT1 436 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 CEP44Q9C0F1 390 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 ZNF212Q9UDV6 495 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 IL17BQ9UHF5 180 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 WASF2Q9Y6W5 498 aa9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 ANKRD17O75179 2603 aaKnown RBP9.35□□□□□ -0.91
NIF3L1-203ENST00000409129 NBASA2RRP1 2371 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 NEMP2A6NFY4 417 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 A6NNZ2 444 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 GOLGA8SH3BPF8 625 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 SCAMP1O15126 338 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 OPA1O60313 960 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 PAK4O96013 591 aaPredicted RBP9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 ADRB3P13945 408 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 ITGB7P26010 798 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 L1CAMP32004 1257 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 FLT3P36888 993 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 SERPINH1P50454 418 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 DNA2P51530 1060 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 NEK3P51956 506 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 UBE2HP62256 183 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 RPS21P63220 83 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 RHDQ02161 417 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 GNA12Q03113 381 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 TBC1D25Q3MII6 688 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 C2CD6Q53TS8 623 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 ZNF542PQ5EBM4 170 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 CARD16Q5EG05 197 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 MIIPQ5JXC2 388 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 KLHDC7AQ5VTJ3 777 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 TAF3Q5VWG9 929 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 CDCP2Q5VXM1 449 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 KIAA1614Q5VZ46 1190 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 KIAA1161Q6NSJ0 714 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 TRNP1Q6NT89 227 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 ARCQ7LC44 396 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 BNIPLQ7Z465 357 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 SLC22A18ASQ8N1D0 253 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 PCDH20Q8N6Y1 951 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 MSANTD4Q8NCY6 345 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 APOLD1Q96LR9 279 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 CFAP57Q96MR6 1250 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 TUBGCP2Q9BSJ2 902 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 ZYG11BQ9C0D3 744 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 CAAP1Q9H8G2 361 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 ATP13A1Q9HD20 1204 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 DNAJC28Q9NX36 388 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 NLGN3Q9NZ94 848 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 PPARGC1AQ9UBK2 798 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 TMEM59LQ9UK28 342 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 FADS3Q9Y5Q0 445 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 FHOD1Q9Y613 1164 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 CREBBPQ92793 2442 aa9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 TLN1Q9Y490 2541 aaKnown RBP9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 COL27A1Q8IZC6 1860 aaPredicted RBP9.34□□□□□ -0.91
NIF3L1-203ENST00000409129 DOPEY1Q5JWR5 2465 aa9.33□□□□□ -0.92
NIF3L1-203ENST00000409129 ICE1Q9Y2F5 2266 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms