RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 TMEM116Q8NCL8 245 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 FAR1Q8WVX9 515 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 FCRL5Q96RD9 977 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 SIN3AQ96ST3 1273 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 ZNF341Q9BYN7 854 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 FTOQ9C0B1 505 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 FBRSL1Q9HCM7 1045 aaKnown RBP5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 SNTG1Q9NSN8 517 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 ATP8A2Q9NTI2 1148 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 HSPB7Q9UBY9 170 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 CFDP1Q9UEE9 299 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 CHORDC1Q9UHD1 332 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 RPS6KA6Q9UK32 745 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 A4GNTQ9UNA3 340 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 ICKQ9UPZ9 632 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 MTMR6Q9Y217 621 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 PCDHGB5Q9Y5G0 923 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 PTPRKQ15262 1439 aa5.03□□□□□ -1.6
HMGB3P18-201ENST00000406327 MAPKBP1O60336 1514 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 EPRSP07814 1512 aaKnown RBP5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 GRIN2AQ12879 1464 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 FAM237BA0A1B0GVD1 139 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 TARM1B6A8C7 271 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 LDLRAD4O15165 306 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 INPPL1O15357 1258 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 P4HA2O15460 535 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 TGFB1I1O43294 461 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 IPO7O95373 1038 aaKnown RBP5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 NFATC1O95644 943 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 CD63P08962 238 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 CYP2D6P10635 497 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 SLC2A4P14672 509 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 PTPN2P17706 415 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 GPD1P21695 349 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 YWHAQP27348 245 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 ICAM3P32942 547 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 TTKP33981 857 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 IDUAP35475 653 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 NNMTP40261 264 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 SOX2P48431 317 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 CACNA2D1P54289 1103 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 SIM1P81133 766 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 CSTF3Q12996 717 aaKnown RBP5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 STK4Q13043 487 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 MTA1Q13330 715 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 VEPH1Q14D04 833 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 PSMD6Q15008 389 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 MED22Q15528 200 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 AKNAD1Q5T1N1 836 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 UBAP2Q5T6F2 1119 aaKnown RBP5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 GPR139Q6DWJ6 353 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 KLHL35Q6PF15 583 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 CYB5R4Q7L1T6 521 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 TEX11Q8IYF3 940 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 C17orf53Q8N3J3 647 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 WDTC1Q8N5D0 677 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 HDAC7Q8WUI4 952 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 TMEM170AQ8WVE7 144 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 PGAM5Q96HS1 289 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 PRRX2Q99811 253 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 LBHD1Q9BQE6 289 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 DUSP26Q9BV47 211 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 RRP7BPQ9NSQ0 103 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 MORF4L1Q9UBU8 362 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 HAO1Q9UJM8 370 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 WNT6Q9Y6F9 365 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 HFM1A2PYH4 1435 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 MIA2Q96PC5 1412 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 ARHGEF11O15085 1522 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 EHBP1L1Q8N3D4 1523 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 DISP1Q96F81 1524 aa5.02□□□□□ -1.61
HMGB3P18-201ENST00000406327 MAGI1Q96QZ7 1491 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 ZNF335Q9H4Z2 1342 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 TCRBV7S3A2A0A539 114 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 DPPA5A6NC42 116 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 USP17L23D6RBM5 183 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 PAGE4O60829 102 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 DKC1O60832 514 aaKnown RBP eCLIP5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 DDAH2O95865 285 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 PCNAP12004 261 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 RRM1P23921 792 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 PBX3P40426 434 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 HADHAP40939 763 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 ARSFP54793 590 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 HSF1Q00613 529 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 KRTAP1-1Q07627 177 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 NIPAL4Q0D2K0 466 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 NCAPH2Q6IBW4 605 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 HMBOX1Q6NT76 420 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 WDR5BQ86VZ2 330 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 BCAS4Q8TDM0 211 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 GDPD5Q8WTR4 605 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 SGCDQ92629 289 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 GTF3C6Q969F1 213 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 REPS1Q96D71 796 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 CLMNQ96JQ2 1002 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 CMTM3Q96MX0 182 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 GATA5Q9BWX5 397 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 AP1M1Q9BXS5 423 aa5.01□□□□□ -1.61
HMGB3P18-201ENST00000406327 TEX12Q9BXU0 123 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms