RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 FAM90A12PA8MX19 464 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 FAM90A23PA8MXZ1 464 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 MASP2O00187 686 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 ADAM10O14672 748 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 MSI1O43347 362 aaKnown RBP5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 BCAR3O75815 825 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 PRKCHP24723 683 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 CERS1P27544 350 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 HOXD9P28356 352 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 HNF1BP35680 557 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 PGM1P36871 562 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 PTPN9P43378 593 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 TNNT2P45379 298 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 CPA2P48052 419 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 OAZ1P54368 228 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 SLC12A2P55011 1212 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 NR1H2P55055 460 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 VAMP2P63027 116 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 HSF1Q00613 529 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 GHRHRQ02643 423 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 ZNF91Q05481 1191 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 GALNT3Q14435 633 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 IL13RA2Q14627 380 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 DAZAP2Q15038 168 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 SLC4A8Q2Y0W8 1093 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 SLC9C1Q4G0N8 1177 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 INTS11Q5TA45 600 aaKnown RBP5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 PAPD7Q5XG87 772 aaKnown RBP5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 RETSATQ6NUM9 610 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 NAXEQ8NCW5 288 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 LSM14AQ8ND56 463 aaKnown RBP5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 ZBTB10Q96DT7 871 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 SEC62Q99442 399 aaKnown RBP5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 NAP1L4Q99733 375 aaKnown RBP5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 CLSTN3Q9BQT9 956 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 TAOK3Q9H2K8 898 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 ZNF304Q9HCX3 659 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 UBN1Q9NPG3 1134 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 TMEM184CQ9NVA4 438 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 SLC13A4Q9UKG4 626 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 UTS2RQ9UKP6 389 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 NUDCQ9Y266 331 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 MAP3K19Q56UN5 1328 aa5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 BLMP54132 1417 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P19-201ENST00000403971 KCNU1A8MYU2 1149 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 SH3BP5O60239 455 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 CCNT1O60563 726 aaKnown RBP5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 WDHD1O75717 1129 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 CELA2AP08217 269 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 CD63P08962 238 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 CYP19A1P11511 503 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 FCGR2AP12318 317 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 GGT5P36269 586 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 MTNR1AP48039 350 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 SRSF4Q08170 494 aaKnown RBP5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 GOLGA8FQ08AF8 430 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 GALNT2Q10471 571 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 RRS1Q15050 365 aaKnown RBP5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 NFIL3Q16649 462 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 FBXO43Q4G163 708 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 SCAIQ8N9R8 606 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 RUFY2Q8WXA3 655 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 PPM1MQ96MI6 270 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 LMAN2LQ9H0V9 348 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 AAMDCQ9H7C9 122 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 ARHGAP26Q9UNA1 814 aa5.37□□□□□ -1.55
HMGB3P19-201ENST00000403971 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 NEURL1O76050 574 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 IFIT1P09914 478 aaKnown RBP5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 HOXC9P31274 260 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 PSMC2P35998 433 aaKnown RBP5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 AMPHP49418 695 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 NAA25Q14CX7 972 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 WDR43Q15061 677 aaKnown RBP eCLIP5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 FAM171A1Q5VUB5 890 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 KIAA1614Q5VZ46 1190 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 SLC22A25Q6T423 547 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 LRIG3Q6UXM1 1119 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 FAM57BQ71RH2 274 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 CYB5R4Q7L1T6 521 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 NEK8Q86SG6 692 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 NGEFQ8N5V2 710 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 SETD9Q8NE22 299 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 ST8SIA4Q92187 359 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 NCSTNQ92542 709 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 EME1Q96AY2 570 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 ELP4Q96EB1 424 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 SIGLEC11Q96RL6 698 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 CADM1Q9BY67 442 aaKnown RBP5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 AGXT2Q9BYV1 514 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 PAIP1Q9H074 479 aaKnown RBP5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 PNNQ9H307 717 aaKnown RBP5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 TMEM45AQ9NWC5 275 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 TBX20Q9UMR3 447 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 SUFUQ9UMX1 484 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 FRMD4BQ9Y2L6 1034 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 PLEKHG2Q9H7P9 1386 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 JCADQ9P266 1359 aa5.36□□□□□ -1.55
HMGB3P19-201ENST00000403971 NCAPD2Q15021 1401 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms