RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 PAAF1Q9BRP4 392 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 C1QTNF1Q9BXJ1 281 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 ADAMTS10Q9H324 1103 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 CAAP1Q9H8G2 361 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 NDFIP2Q9NV92 336 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 RIMS3Q9UJD0 308 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 COMMD3-BMI1R4GMX3 469 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 TTC3P53804 2025 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 FAM95CA0A1B0GW59 222 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 TCAF2A6NFQ2 919 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 ZNF487B1APH4 448 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 GPR32O75388 356 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 CKMT2P17540 419 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 MAGEA12P43365 314 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 CACNB2Q08289 660 aaPredicted RBP12.13□□□□□ -0.47
RBM39-206ENST00000403542 KYAT1Q16773 422 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 LRRC23Q53EV4 343 aaPredicted RBP12.13□□□□□ -0.47
RBM39-206ENST00000403542 TSTD2Q5T7W7 516 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 RP9Q8TA86 221 aaKnown RBP12.13□□□□□ -0.47
RBM39-206ENST00000403542 HEXDCQ8WVB3 486 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 PCED1BQ96HM7 432 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 PRICKLE1Q96MT3 831 aaPredicted RBP12.13□□□□□ -0.47
RBM39-206ENST00000403542 COLEC11Q9BWP8 271 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 EFCAB1Q9HAE3 211 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 CRTAC1Q9NQ79 661 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 PTGDR2Q9Y5Y4 395 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 HTTP42858 3142 aa12.13□□□□□ -0.47
RBM39-206ENST00000403542 TMEM114B3SHH9 223 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 CASQ2O14958 399 aaPredicted RBP12.12□□□□□ -0.47
RBM39-206ENST00000403542 TREHO43280 583 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 MSI1O43347 362 aaKnown RBP12.12□□□□□ -0.47
RBM39-206ENST00000403542 SNAI1O95863 264 aaPredicted RBP12.12□□□□□ -0.47
RBM39-206ENST00000403542 UGT1A6P19224 532 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 SLC1A2P43004 574 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 CDH15P55291 814 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 C1QTNF8P60827 252 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 USP46P62068 366 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 PPIDQ08752 370 aaKnown RBP12.12□□□□□ -0.47
RBM39-206ENST00000403542 PRKAA1Q13131 559 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 CBLBQ13191 982 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 DBN1Q16643 649 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 MTX3Q5HYI7 312 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 KCTD11Q693B1 232 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 TRIM67Q6ZTA4 783 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 SMOQ99835 787 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 BRD8Q9H0E9 1235 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 COQ10BQ9H8M1 238 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 ZBTB26Q9HCK0 441 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 RHBDL2Q9NX52 303 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 C6orf203Q9P0P8 240 aaPredicted RBP12.12□□□□□ -0.47
RBM39-206ENST00000403542 SFMBT1Q9UHJ3 866 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 C7orf72A4D263 438 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 CASTOR2A6NHX0 329 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 TOMM70O94826 608 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 SEC24DO94855 1032 aaPredicted RBP12.12□□□□□ -0.47
RBM39-206ENST00000403542 MMP3P08254 477 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 STMN1P16949 149 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 MAXP61244 160 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 CDH17Q12864 832 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 NAB1Q13506 487 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 MAP7Q14244 749 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 HAPLN3Q96S86 360 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 GPR22Q99680 433 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 IL22Q9GZX6 179 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 OSBPL2Q9H1P3 480 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 PREBQ9HCU5 417 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 GTF2IRD1Q9UHL9 959 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 ADAM28Q9UKQ2 775 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 FAM149AA5PLN7 773 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 KLHL33A6NCF5 533 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 RPL5P46777 297 aaKnown RBP12.12□□□□□ -0.47
RBM39-206ENST00000403542 SLC12A2P55011 1212 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 CDH13P55290 713 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 ITKQ08881 620 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 SLC12A1Q13621 1099 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 ZBTB46Q86UZ6 589 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 KDM1BQ8NB78 822 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 SCAMP5Q8TAC9 235 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 SH3RF2Q8TEC5 729 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 DGCR14Q96DF8 476 aaKnown RBP12.12□□□□□ -0.47
RBM39-206ENST00000403542 LRCH3Q96II8 777 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 TEKT5Q96M29 485 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 ZNF560Q96MR9 790 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 HNRNPABQ99729 332 aaKnown RBP12.12□□□□□ -0.47
RBM39-206ENST00000403542 RHOJQ9H4E5 214 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 NOL11Q9H8H0 719 aaKnown RBP12.12□□□□□ -0.47
RBM39-206ENST00000403542 MPP6Q9NZW5 540 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 IPPQ9Y573 584 aa12.12□□□□□ -0.47
RBM39-206ENST00000403542 TIPRLO75663 272 aa12.11□□□□□ -0.47
RBM39-206ENST00000403542 SLC4A1P02730 911 aa12.11□□□□□ -0.47
RBM39-206ENST00000403542 DARSP14868 501 aaKnown RBP12.11□□□□□ -0.47
RBM39-206ENST00000403542 DAOAP59103 153 aa12.11□□□□□ -0.47
RBM39-206ENST00000403542 RAB10P61026 200 aa12.11□□□□□ -0.47
RBM39-206ENST00000403542 PSME3P61289 254 aa12.11□□□□□ -0.47
RBM39-206ENST00000403542 COG7P83436 770 aa12.11□□□□□ -0.47
RBM39-206ENST00000403542 GEN1Q17RS7 908 aa12.11□□□□□ -0.47
RBM39-206ENST00000403542 METTL21CQ5VZV1 264 aa12.11□□□□□ -0.47
RBM39-206ENST00000403542 ALKAL1Q6UXT8 129 aa12.11□□□□□ -0.47
RBM39-206ENST00000403542 PDZD4Q76G19 769 aaPredicted RBP12.11□□□□□ -0.47
RBM39-206ENST00000403542 ZNF354CQ86Y25 554 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms