RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 PPM1LQ5SGD2 360 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 STEAP4Q687X5 459 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 NAPRTQ6XQN6 538 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 FSTL5Q8N475 847 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 SNX31Q8N9S9 440 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 ZMIZ2Q8NF64 920 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 GDPD5Q8WTR4 605 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 KCTD13Q8WZ19 329 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 RCN3Q96D15 328 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 GCNAQ96QF7 691 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 SLC9A7Q96T83 725 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 PTPN18Q99952 460 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 SPON2Q9BUD6 331 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 MLPHQ9BV36 600 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 KATNBL1Q9H079 304 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 WDR6Q9NNW5 1121 aaKnown RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 SLC2A6Q9UGQ3 507 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 IPO11Q9UI26 975 aaKnown RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 CDH22Q9UJ99 828 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 TSR3Q9UJK0 312 aaKnown RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 ADAM28Q9UKQ2 775 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 CRYL1Q9Y2S2 319 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 PCDHB12Q9Y5F1 795 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 USP3Q9Y6I4 520 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 ATP6AP2A0A1C7CYW4 349 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 ATP6AP2O75787 350 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 AHSGP02765 367 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 APOA4P06727 396 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 PIRTP0C851 137 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 KPNA2P52292 529 aaKnown RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 YWHAHQ04917 246 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 DDR2Q16832 855 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 KIF19Q2TAC6 998 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 NEPROQ6NW34 567 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 DCLRE1AQ6PJP8 1040 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 RPS27LQ71UM5 84 aaKnown RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 LCA5Q86VQ0 697 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 PCDH20Q8N6Y1 951 aaKnown RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 MAPK15Q8TD08 544 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 BLOC1S5Q8TDH9 187 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 ECSITQ9BQ95 431 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 SIKE1Q9BRV8 207 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 C11orf84Q9BUA3 381 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 SLC39A8Q9C0K1 460 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 RHOJQ9H4E5 214 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 POMKQ9H5K3 350 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 IL1RL2Q9HB29 575 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 GLOD4Q9HC38 313 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 GPAMQ9HCL2 828 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 VCX3AQ9NNX9 186 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 TMEM30AQ9NV96 361 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 MKS1Q9NXB0 559 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 NSMCE4AQ9NXX6 385 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 FBXO5Q9UKT4 447 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 PADI3Q9ULW8 664 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 TMEM233B4DJY2 109 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 F8W8V4 182 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 AP3B1O00203 1094 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 AKR1A1P14550 325 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 AOC1P19801 751 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 PIK3R1P27986 724 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 RAP1GDS1P52306 607 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 CSE1LP55060 971 aaKnown RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 PRKAA1Q13131 559 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 FAM83EQ2M2I3 478 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 LSM12Q3MHD2 195 aaKnown RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 LIPMQ5VYY2 423 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 BNC2Q6ZN30 1099 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 ABI1Q8IZP0 508 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 KYQ8NBH2 561 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 ZSCAN18Q8TBC5 510 aaPredicted RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 PDCD6IPQ8WUM4 868 aaKnown RBP7.79□□□□□ -1.16
HDAC9-201ENST00000401921 NTAN1Q96AB6 310 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 IFT43Q96FT9 208 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 SLC2A13Q96QE2 648 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 SORT1Q99523 831 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 BRD8Q9H0E9 1235 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 S100A14Q9HCY8 104 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 CASS4Q9NQ75 786 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 RRN3Q9NYV6 651 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 NCKIPSDQ9NZQ3 722 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 CCDC167Q9P0B6 97 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 BCAP29Q9UHQ4 241 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 POMPQ9Y244 141 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 RAP2CQ9Y3L5 183 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 PTCH2Q9Y6C5 1203 aa7.79□□□□□ -1.16
HDAC9-201ENST00000401921 A0A088AWK7 358 aa7.78□□□□□ -1.16
HDAC9-201ENST00000401921 ZCWPW2A0A1B0GU75 182 aa7.78□□□□□ -1.16
HDAC9-201ENST00000401921 MBLAC1A4D2B0 266 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-201ENST00000401921 MYADML2A6NDP7 307 aa7.78□□□□□ -1.16
HDAC9-201ENST00000401921 MYCP01106 439 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-201ENST00000401921 MYL4P12829 197 aa7.78□□□□□ -1.16
HDAC9-201ENST00000401921 CPB1P15086 417 aa7.78□□□□□ -1.16
HDAC9-201ENST00000401921 SP100P23497 879 aaPredicted RBP7.78□□□□□ -1.16
HDAC9-201ENST00000401921 CD86P42081 329 aa7.78□□□□□ -1.16
HDAC9-201ENST00000401921 CASP2P42575 452 aa7.78□□□□□ -1.16
HDAC9-201ENST00000401921 TAS2R39P59534 338 aa7.78□□□□□ -1.16
HDAC9-201ENST00000401921 RAB10P61026 200 aa7.78□□□□□ -1.16
HDAC9-201ENST00000401921 OTUD1Q5VV17 481 aaPredicted RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms