RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 PROCP04070 461 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 MYL4P12829 197 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 POU3F3P20264 500 aaPredicted RBP16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 GP5P40197 560 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ARHGAP8P85298 464 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 DPYSQ14117 519 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 FRG1Q14331 258 aaKnown RBP16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PCLAFQ15004 111 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 DUSP6Q16828 381 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 DCAF6Q58WW2 860 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 GRTP1Q5TC63 336 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 OTUD1Q5VV17 481 aaPredicted RBP16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 CCDC149Q6ZUS6 474 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PDZD4Q76G19 769 aaPredicted RBP16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 RBM23Q86U06 439 aaKnown RBP16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PPP2R3CQ969Q6 453 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 LRCH3Q96II8 777 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ZNF778Q96MU6 729 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 CDCA3Q99618 268 aaPredicted RBP16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 EBF4Q9BQW3 602 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 GPAMQ9HCL2 828 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 DNAJC28Q9NX36 388 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SEPT10Q9P0V9 454 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SLC17A6Q9P2U8 582 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 APOBEC2Q9Y235 224 aaKnown RBP16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 MYO7AQ13402 2215 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PLXNA3P51805 1871 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ITM2AO43736 263 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SOAT2O75908 522 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ATF6P18850 670 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 MX2P20592 715 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ALDH1A3P47895 512 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 GPR15P49685 360 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 AIF1P55008 147 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ACTR3P61158 418 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 MXRA7P84157 204 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 TUBB3Q13509 450 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 RABGAP1LQ5R372 815 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ZNF697Q5TEC3 545 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 RIPOR1Q6ZS17 1223 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ZNF567Q8N184 647 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 CCNYQ8ND76 341 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 FBXO27Q8NI29 283 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ISL2Q96A47 359 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 FAM136AQ96C01 138 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SLC2A13Q96QE2 648 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 DPP7Q9UHL4 492 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 INSL5Q9Y5Q6 135 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 EEF2KO00418 725 aaKnown RBP16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ALOX15P16050 662 aaPredicted RBP16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 NRIP1P48552 1158 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 KCNC3Q14003 757 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 UBAP2LQ14157 1087 aaKnown RBP16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 CCDC153Q494R4 210 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 BSPRYQ5W0U4 402 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 GPR153Q6NV75 609 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 RFX8Q6ZV50 586 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 GPRIN1Q7Z2K8 1008 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 MYLK4Q86YV6 388 aaPredicted RBP16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 NUP93Q8N1F7 819 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 DTX3LQ8TDB6 740 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 CERS2Q96G23 380 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 THTPAQ9BU02 230 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 NSUN3Q9H649 340 aaKnown RBP16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 LRRC4Q9HBW1 653 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 IL37Q9NZH6 218 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SOX13Q9UN79 622 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 YIPF1Q9Y548 306 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 HCFC2Q9Y5Z7 792 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PSAT1Q9Y617 370 aa16.17■□□□□ 0.18
CHRFAM7A-203ENST00000401522 MTCL1Q9Y4B5 1905 aaKnown RBP16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 M0QYT0 321 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 DCLK1O15075 740 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 LYPLA1O75608 230 aaPredicted RBP16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PDHA1P08559 390 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 EPCAMP16422 314 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 KCNA4P22459 653 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 TYK2P29597 1187 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 MAGEA12P43365 314 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 TKTL1P51854 596 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SLC5A3P53794 718 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 DEUP1Q05D60 604 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PLD1Q13393 1074 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SDHAF4Q5VUM1 108 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SIX6OS1Q8N1H7 587 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SLC7A14Q8TBB6 771 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 LRRC40Q9H9A6 602 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 COMMD8Q9NX08 183 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 COPG2Q9UBF2 871 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 RPS6KL1Q9Y6S9 549 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 MYO9BQ13459 2157 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PATJQ8NI35 1801 aa16.16■□□□□ 0.18
CHRFAM7A-203ENST00000401522 CREB3O43889 395 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PRKCGP05129 697 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 C8AP07357 584 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 HARS2P49590 506 aaKnown RBP16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SERPINB8P50452 374 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 AP2B1P63010 937 aa16.15■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PM20D1Q6GTS8 502 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms