RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 KCTD15Q96SI1 283 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-203ENST00000400772 DHX35Q9H5Z1 703 aaKnown RBP16.12■□□□□ 0.17
ATG4B-203ENST00000400772 ERVMER34-1Q9H9K5 563 aa16.12■□□□□ 0.17
ATG4B-203ENST00000400772 GDF3Q9NR23 364 aa16.12■□□□□ 0.17
ATG4B-203ENST00000400772 MYO1AQ9UBC5 1043 aa16.12■□□□□ 0.17
ATG4B-203ENST00000400772 KLK13Q9UKR3 277 aa16.12■□□□□ 0.17
ATG4B-203ENST00000400772 FADS3Q9Y5Q0 445 aa16.12■□□□□ 0.17
ATG4B-203ENST00000400772 BZW2Q9Y6E2 419 aaKnown RBP16.12■□□□□ 0.17
ATG4B-203ENST00000400772 TP53BP1Q12888 1972 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-203ENST00000400772 FAM221BA6H8Z2 402 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 ZSCAN5CA6NGD5 496 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-203ENST00000400772 C1QTNF9BB2RNN3 333 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 SLC31A1O15431 190 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 LRCH4O75427 683 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 POP4O95707 220 aaKnown RBP16.11■□□□□ 0.17
ATG4B-203ENST00000400772 GYPCP04921 128 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 SERPING1P05155 500 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 C1QTNF9P0C862 333 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 PRLRP16471 622 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 FGL2Q14314 439 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 CYTH1Q15438 398 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 TMEM259Q4ZIN3 620 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 INO80DQ53TQ3 878 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-203ENST00000400772 TDRD12Q587J7 1177 aaKnown RBP16.11■□□□□ 0.17
ATG4B-203ENST00000400772 FBXL19Q6PCT2 694 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 PARS2Q7L3T8 475 aaKnown RBP16.11■□□□□ 0.17
ATG4B-203ENST00000400772 IQCHQ86VS3 1027 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 GATAD2AQ86YP4 633 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 RYBPQ8N488 228 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-203ENST00000400772 CASKIN2Q8WXE0 1202 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 ADAMTS14Q8WXS8 1223 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 TRIM11Q96F44 468 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 LRIG1Q96JA1 1093 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 CDC6Q99741 560 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.11■□□□□ 0.17
ATG4B-203ENST00000400772 SLC39A8Q9C0K1 460 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 FZD3Q9NPG1 666 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 SCINQ9Y6U3 715 aa16.11■□□□□ 0.17
ATG4B-203ENST00000400772 A0A087X0T9 212 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 C16orf96A6NNT2 1141 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 EIF3CLB5ME19 914 aaKnown RBP16.1■□□□□ 0.17
ATG4B-203ENST00000400772 J3KR12 359 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 EEF2KO00418 725 aaKnown RBP16.1■□□□□ 0.17
ATG4B-203ENST00000400772 KRIT1O00522 736 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 SPINT1O43278 529 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 AP1G1O43747 822 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 RNF8O76064 485 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 DKK1O94907 266 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 PCDH8O95206 1070 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 ATXN1LP0C7T5 689 aaKnown RBP16.1■□□□□ 0.17
ATG4B-203ENST00000400772 FAM228BP0C875 321 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 TCF4P15884 667 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 IL1R2P27930 398 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 ABL2P42684 1182 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 GRK6P43250 576 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 RXRGP48443 463 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 OVGP1Q12889 678 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 BNIP3Q12983 259 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 SKOR2Q2VWA4 1001 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-203ENST00000400772 ZNF805Q5CZA5 627 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 AFMIDQ63HM1 303 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 RFX8Q6ZV50 586 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 GATA6Q92908 595 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 IQCDQ96DY2 449 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 CELF6Q96J87 481 aaKnown RBP16.1■□□□□ 0.17
ATG4B-203ENST00000400772 EIF3CQ99613 913 aaKnown RBP16.1■□□□□ 0.17
ATG4B-203ENST00000400772 MYOCQ99972 504 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 XPO4Q9C0E2 1151 aaKnown RBP16.1■□□□□ 0.17
ATG4B-203ENST00000400772 THAP2Q9H0W7 228 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 PDFQ9HBH1 243 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 MRPL47Q9HD33 250 aaKnown RBP16.1■□□□□ 0.17
ATG4B-203ENST00000400772 LUC7L2Q9Y383 392 aaKnown RBP16.1■□□□□ 0.17
ATG4B-203ENST00000400772 MSRB2Q9Y3D2 182 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 NEUROG3Q9Y4Z2 214 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 WDFY3Q8IZQ1 3526 aa16.1■□□□□ 0.17
ATG4B-203ENST00000400772 INSIG1O15503 277 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 PRPSAP2O60256 369 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 UGT2B4P06133 528 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 ERCC2P18074 760 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 EPHA8P29322 1005 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-203ENST00000400772 CASP14P31944 242 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 PCK1P35558 622 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 PAPOLAP51003 745 aaKnown RBP16.09■□□□□ 0.17
ATG4B-203ENST00000400772 NDST2P52849 883 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 UNQ6494/PRO21346Q6UXR6 183 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 KANSL1Q7Z3B3 1105 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 PSTKQ8IV42 348 aaKnown RBP16.09■□□□□ 0.17
ATG4B-203ENST00000400772 ARHGAP12Q8IWW6 846 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 KLHDC7BQ96G42 594 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 FEM1CQ96JP0 617 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 BTBD6Q96KE9 485 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 BMFQ96LC9 184 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 KLHL32Q96NJ5 620 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 SLC17A9Q9BYT1 436 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 CWC15Q9P013 229 aaKnown RBP16.09■□□□□ 0.17
ATG4B-203ENST00000400772 LHX3Q9UBR4 397 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 GGT7Q9UJ14 662 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 NENFQ9UMX5 172 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 MFHAS1Q9Y4C4 1052 aa16.09■□□□□ 0.17
ATG4B-203ENST00000400772 TRPM6Q9BX84 2022 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms