RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 GBP4Q96PP9 640 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 GCNAQ96QF7 691 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 MTMR9Q96QG7 549 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 TEX12Q9BXU0 123 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 FAM129AQ9BZQ8 928 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 ZNF518BQ9C0D4 1074 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 REXO4Q9GZR2 422 aaKnown RBP5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 PIDD1Q9HB75 910 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 LTB4R2Q9NPC1 389 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 HEYLQ9NQ87 328 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 RIC8BQ9NVN3 520 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 FETUBQ9UGM5 382 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 ADGRE2Q9UHX3 823 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 TUBE1Q9UJT0 475 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 CFAP45Q9UL16 551 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 MED16Q9Y2X0 877 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 SQORQ9Y6N5 450 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 MYO7AQ13402 2215 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 COL6A3P12111 3177 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 TRIP11Q15643 1979 aa5.55□□□□□ -1.52
HMGB3P7-201ENST00000400214 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 SMIM35A0A1B0GVV1 85 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 RSPH10B2B2RC85 870 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 KIF28PB7ZC32 967 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 PGRMC2O15173 223 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 FGF10O15520 208 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 KIF1CO43896 1103 aaKnown RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 NEMFO60524 1076 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 NOL3O60936 208 aaKnown RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 TSC22D2O75157 780 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 PPP6R2O75170 966 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 RGS9O75916 674 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 BCAS2O75934 225 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 GCNT3O95395 438 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 BAG4O95429 457 aaKnown RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 GLP2RO95838 553 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 PNPP00491 289 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 PRLP01236 227 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 SPARCP09486 303 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 RSPH10BP0C881 870 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 MYBL1P10243 752 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 PTPN1P18031 435 aaKnown RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 KLRC1P26715 233 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 MARK3P27448 753 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 COL8A1P27658 744 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 GJB2P29033 226 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 PPARGP37231 505 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 POLGP54098 1239 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 SLC6A3Q01959 620 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 GUCY1B3Q02153 619 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 GBE1Q04446 702 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 MGAT3Q09327 533 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 MGAT5Q09328 741 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 RPS6KA2Q15349 733 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 DCAF17Q5H9S7 520 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 EXOSC6Q5RKV6 272 aaKnown RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 BTBD8Q5XKL5 378 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 MTHFD1LQ6UB35 978 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 ARHGEF18Q6ZSZ5 1173 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 MIER3Q7Z3K6 550 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 RABEPKQ7Z6M1 372 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 RSPH3Q86UC2 560 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 MON1AQ86VX9 555 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 SMYD4Q8IYR2 804 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 LINC01465Q8N7H1 131 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 C4orf32Q8N8J7 132 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 DENND6BQ8NEG7 585 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 PHOSPHO2Q8TCD6 241 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 GAB3Q8WWW8 586 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 HOXB13Q92826 284 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 MR1Q95460 341 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 FAM162AQ96A26 154 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 C1orf74Q96LT6 269 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 CCDC114Q96M63 670 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 Q96M66 194 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 HSD17B14Q9BPX1 270 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 NT5C3AQ9H0P0 336 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 EPB41L1Q9H4G0 881 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 DDX43Q9NXZ2 648 aaKnown RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 C6orf203Q9P0P8 240 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 EXTL2Q9UBQ6 330 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 PCDHA12Q9UN75 941 aa5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 PIN4Q9Y237 131 aaKnown RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 PRRC2BQ5JSZ5 2229 aaKnown RBP5.54□□□□□ -1.52
HMGB3P7-201ENST00000400214 COL4A6Q14031 1691 aa5.53□□□□□ -1.52
HMGB3P7-201ENST00000400214 KIAA1671Q9BY89 1806 aa5.53□□□□□ -1.52
HMGB3P7-201ENST00000400214 ATG2AQ2TAZ0 1938 aa5.53□□□□□ -1.52
HMGB3P7-201ENST00000400214 TMEM265A0A087WTH1 108 aa5.53□□□□□ -1.52
HMGB3P7-201ENST00000400214 IGKV6-21A0A0C4DH24 114 aa5.53□□□□□ -1.52
HMGB3P7-201ENST00000400214 A0A1W2PRV1 198 aa5.53□□□□□ -1.52
HMGB3P7-201ENST00000400214 MBD3L4A6NDZ8 208 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P7-201ENST00000400214 FAM90A18PA6NE21 464 aa5.53□□□□□ -1.52
HMGB3P7-201ENST00000400214 MBD3L3A6NE82 208 aaPredicted RBP5.53□□□□□ -1.52
HMGB3P7-201ENST00000400214 FAM90A16PA6NEW6 464 aa5.53□□□□□ -1.52
HMGB3P7-201ENST00000400214 FAM90A9PA6NNJ1 464 aa5.53□□□□□ -1.52
HMGB3P7-201ENST00000400214 FAM90A5PA8MXJ8 464 aa5.53□□□□□ -1.52
HMGB3P7-201ENST00000400214 LAD1O00515 517 aa5.53□□□□□ -1.52
HMGB3P7-201ENST00000400214 MCF2LO15068 1137 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms