RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 NR2F6P10588 404 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 GPD2P43304 727 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 POLD2P49005 469 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 GNG2P59768 71 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 IFI35P80217 286 aaPredicted RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 ZNF177Q13360 481 aaPredicted RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 TMEM132DQ14C87 1099 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 ARSHQ5FYA8 562 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 EIF5AL1Q6IS14 154 aaKnown RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 NT5DC3Q86UY8 548 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 AMIGO1Q86WK6 493 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 RGL4Q8IZJ4 473 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 ZNF420Q8TAQ5 688 aaPredicted RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 CCSER2Q9H7U1 834 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 ARHGAP20Q9P2F6 1191 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 LIMD1Q9UGP4 676 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 ABCG2Q9UNQ0 655 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 ATP10AO60312 1499 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 RPL4P36578 427 aaKnown RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 NFIAQ12857 509 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 KCNA10Q16322 511 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 CNPY1Q3B7I2 92 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 XKR3Q5GH77 459 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 MEIOBQ8N635 442 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 SLC38A2Q96QD8 506 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 YME1L1Q96TA2 773 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 RBM4BQ9BQ04 359 aaKnown RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 SPATA5L1Q9BVQ7 753 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 RBM4Q9BWF3 364 aaKnown RBP8.46□□□□□ -1.06
CHD8-201ENST00000399982 LRRC19Q9H756 370 aa8.46□□□□□ -1.06
CHD8-201ENST00000399982 DCLK1O15075 740 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 GPIP06744 558 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 ITGB6P18564 788 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 HOXC12P31275 282 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CD151P48509 253 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CYP4F2P78329 520 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CYP4F3Q08477 520 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 EZH2Q15910 746 aaKnown RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 PPM1LQ5SGD2 360 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 THAP5Q7Z6K1 395 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 ZNF540Q8NDQ6 660 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 ART4Q93070 314 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 TUBA1CQ9BQE3 449 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CYP3A43Q9HB55 503 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 EVA1BQ9NVM1 165 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 DDX43Q9NXZ2 648 aaKnown RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 HDAC3O15379 428 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 RGS14O43566 566 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 PRKAB2O43741 272 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 LRIG2O94898 1065 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CRTAMO95727 393 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 NFKB1P19838 968 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CMPK2Q5EBM0 449 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 HIPK1Q86Z02 1210 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 TEX19Q8NA77 164 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 TSEN2Q8NCE0 465 aaKnown RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 SLC20A1Q8WUM9 679 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 C7orf26Q96N11 449 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 ACOX2Q99424 681 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CHST12Q9NRB3 414 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.45□□□□□ -1.06
CHD8-201ENST00000399982 DNAJC11Q9NVH1 559 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 RAB23Q9ULC3 237 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 RAP2CQ9Y3L5 183 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 TFRCP02786 760 aaKnown RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 RLN1P04808 185 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 AKT2P31751 481 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 HNRNPH3P31942 346 aaKnown RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 ATXN1P54253 815 aaKnown RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 ZNF829Q3KNS6 432 aaPredicted RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 ERFEQ4G0M1 354 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 SNAP47Q5SQN1 464 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CBWD2Q8IUF1 395 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 SENP6Q9GZR1 1112 aaPredicted RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 AASSQ9UDR5 926 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CENPBD1B2RD01 187 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 TULP3O75386 442 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 IFNA6P05013 189 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CDH17Q12864 832 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 DGLUCYQ7Z3D6 616 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 DSELQ8IZU8 1212 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 MPP5Q8N3R9 675 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 NOS2P35228 1153 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 SGCGQ13326 291 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 RASAL3Q86YV0 1011 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CNTD1Q8N815 330 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 KDM6AO15550 1401 aaPredicted RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 C5orf60A6NFR6 353 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 GTPBP1O00178 669 aaKnown RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 PSMD9O00233 223 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 FBXO21O94952 628 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 OR5F1O95221 314 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 ZBTB11O95625 1053 aaPredicted RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 PHC1P78364 1004 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 CUL2Q13617 745 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 PTGES3Q15185 160 aaKnown RBP8.45□□□□□ -1.06
CHD8-201ENST00000399982 CCNYL2Q5T2Q4 361 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 RNF220Q5VTB9 566 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 OR8H1Q8NGG4 311 aa8.45□□□□□ -1.06
CHD8-201ENST00000399982 OR52L1Q8NGH7 329 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms