RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 ANKRD23Q86SG2 305 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 PTGR2Q8N8N7 351 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 MTERF3Q96E29 417 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 APOPT1Q96IL0 206 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 CPNE1Q99829 537 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 KLHL28Q9NXS3 571 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 NHSQ6T4R5 1651 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 ANKDD1BA6NHY2 528 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 PSMC3P17980 439 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 FAM110CQ1W6H9 321 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 RINLQ6ZS11 566 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 SYT12Q8IV01 421 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 EFCAB3Q8N7B9 438 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 CDYL2Q8N8U2 506 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 GPR156Q8NFN8 814 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 KREMEN1Q96MU8 473 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 CPXM1Q96SM3 734 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 TOMM70O94826 608 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 MPOP05164 745 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 CYP2A6P11509 494 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 PBX3P40426 434 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 ZCWPW2Q504Y3 356 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 RFWD3Q6PCD5 774 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 DCLRE1AQ6PJP8 1040 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 IZUMO2Q6UXV1 221 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 COLGALT2Q8IYK4 626 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 CERS2Q96G23 380 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 CAPNS2Q96L46 248 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 SH3GL1Q99961 368 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 IL22Q9GZX6 179 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 FBXO5Q9UKT4 447 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 GPSM3Q9Y4H4 160 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 CNTNAP1P78357 1384 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 GPR25O00155 361 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 SCAMP1O15126 338 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 CLTBP09497 229 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 ATP4AP20648 1035 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 MATKP42679 507 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 MAPK10P53779 464 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 MRPS5P82675 430 aaKnown RBP11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 OASLQ15646 514 aaKnown RBP11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 USP39Q53GS9 565 aaKnown RBP11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 PCID2Q5JVF3 399 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 FAM182AQ5T1J6 154 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 SH3BP5LQ7L8J4 393 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 IRF2BP2Q7Z5L9 587 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 KCTD4Q8WVF5 259 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 TTPALQ9BTX7 342 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 BTAF1O14981 1849 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 ZNF862O60290 1169 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 UMPSP11172 480 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 FEN1P39748 380 aaKnown RBP11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 RANBP1P43487 201 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 SEMA5AQ13591 1074 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 CMC1Q7Z7K0 106 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 GATAD2AQ86YP4 633 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 FAM9CQ8IZT9 166 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 C2orf73Q8N5S3 287 aaPredicted RBP11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 FAM126AQ9BYI3 521 aaPredicted RBP11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 TLE6Q9H808 572 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 FAM237BA0A1B0GVD1 139 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 HACD1B0YJ81 288 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 OPLAHO14841 1288 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 LIASO43766 372 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 ERAL1O75616 437 aaKnown RBP11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 HNRNPLP14866 589 aaKnown RBP eCLIP11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 PTPN4P29074 926 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 RAD23AP54725 363 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 WNT3AP56704 352 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 ZCCHC9Q8N567 271 aaKnown RBP11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 CXorf40AQ8TE69 158 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 SNRNP27Q8WVK2 155 aaKnown RBP11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 DCLRE1BQ9H816 532 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 SLCO1B3Q9NPD5 702 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 SOHLH2Q9NX45 425 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 CIDEBQ9UHD4 219 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 SHANK3Q9BYB0 1731 aa11.65□□□□□ -0.54
PCDHGA8-201ENST00000398604 CCDC154A6NI56 674 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 SLC9A3R1O14745 358 aaPredicted RBP11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 ADCY6O43306 1168 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 PEX1O43933 1283 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 IFNA16P05015 189 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 CRTC3Q6UUV7 619 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 LINGO4Q6UY18 593 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 IQCKQ8N0W5 287 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 B3GALT6Q96L58 329 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 GMLQ99445 158 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 FTHL17Q9BXU8 183 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 GRIP2Q9C0E4 1043 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 VAV3Q9UKW4 847 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 SLC12A4Q9UP95 1085 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 BTRCQ9Y297 605 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 TBC1D3DA0A087WVF3 549 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 TBC1D3IA0A087WXS9 549 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 TBC1D3EA0A087X179 549 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 TBC1D3KA0A087X1G2 549 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 TBC1D3FA6NER0 549 aaPredicted RBP11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 TBC1D3LB9A6J9 549 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 NEDD8-MDP1E9PL57 170 aa11.64□□□□□ -0.55
PCDHGA8-201ENST00000398604 AGPSO00116 658 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms