RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 USP13Q92995 863 aaPredicted RBP16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 DCUN1D5Q9BTE7 237 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 TPK1Q9H3S4 243 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 MROH8Q9H579 483 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 CAAP1Q9H8G2 361 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 KLHL8Q9P2G9 620 aaPredicted RBP16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 GTF2IRD1Q9UHL9 959 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 GLDCP23378 1020 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 MAGEA12P43365 314 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 ZBTB17Q13105 803 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 FLOT2Q14254 428 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 ZBED5Q49AG3 693 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 OGFOD2Q6N063 350 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 DSELQ8IZU8 1212 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 LILRA2Q8N149 483 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 DNAAF3Q8N9W5 541 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 URGCPQ8TCY9 931 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 ZC3H15Q8WU90 426 aaKnown RBP16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 KBTBD7Q8WVZ9 684 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 UPF1Q92900 1129 aaKnown RBP eCLIP16.19■□□□□ 0.182e-9■■■■■ 48.9
CHMP1A-201ENST00000397901 RMND5BQ96G75 393 aaPredicted RBP16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 MARK4Q96L34 752 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 PKP2Q99959 881 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 HGH1Q9BTY7 390 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 GBA3Q9H227 469 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 NMRAL1Q9HBL8 299 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 PNPLA3Q9NST1 481 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 SNTG2Q9NY99 539 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 GINS2Q9Y248 185 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 ARHGEF37A1IGU5 675 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 CCDC78A2IDD5 438 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 KPNA7A9QM74 516 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 NDUFB5O43674 189 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 SULT1C4O75897 302 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 C2P06681 752 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 INHBBP09529 407 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 LMO2P25791 158 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 GJA5P36382 358 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 ATP1A4Q13733 1029 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 KYQ8NBH2 561 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 TBC1D15Q8TC07 691 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 RCN3Q96D15 328 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 MFSD3Q96ES6 412 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 APOL2Q9BQE5 337 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 FERMT1Q9BQL6 677 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 LRRC40Q9H9A6 602 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 GID8Q9NWU2 228 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 VANGL2Q9ULK5 521 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 ZNF638Q14966 1978 aaKnown RBP16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 PRSS51A0A1B0GVH4 220 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 TK2O00142 265 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 EIF2S1P05198 315 aaKnown RBP16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 ENO3P13929 434 aaPredicted RBP16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 YBX3P16989 372 aaKnown RBP eCLIP16.18■□□□□ 0.184e-9■■□□□ 13.1
CHMP1A-201ENST00000397901 GLUD2P49448 558 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 BCAT1P54687 386 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 PPP2R5DQ14738 602 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 LSM12Q3MHD2 195 aaKnown RBP16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 TMEM198Q66K66 360 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 ANKRD52Q8NB46 1076 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 SLC2A14Q8TDB8 520 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 SREK1Q8WXA9 508 aaKnown RBP16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 DLG3Q92796 817 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 EFHD2Q96C19 240 aaPredicted RBP16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 OSBPL11Q9BXB4 747 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 ILKAPQ9H0C8 392 aaPredicted RBP16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 ATAD3AQ9NVI7 634 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 ADAM28Q9UKQ2 775 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 SLC8A2Q9UPR5 921 aa16.18■□□□□ 0.18
CHMP1A-201ENST00000397901 TMEM114B3SHH9 223 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 ZNF286BP0CG31 522 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 GLRBP48167 497 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 NME3Q13232 169 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 ZNF618Q5T7W0 954 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 METTL21CQ5VZV1 264 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 ARHGAP17Q68EM7 881 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 NXNQ6DKJ4 435 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 KRT80Q6KB66 452 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 C16orf89Q6UX73 402 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 BNC2Q6ZN30 1099 aaPredicted RBP16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 STRADAQ7RTN6 431 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 CARM1Q86X55 608 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 UNKQ9C0B0 810 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 RGSL1A5PLK6 1076 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 STX16-NPEPL1H3BU86 382 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 FOXD2O60548 495 aaPredicted RBP16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 ZNF26P17031 533 aaPredicted RBP16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 UGT1A6P19224 532 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 UGT1A1P22309 533 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 UGT1A4P22310 534 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 UGT1A3P35503 534 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 UGT1A5P35504 534 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 MATKP42679 507 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 MOGQ16653 247 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 KYAT1Q16773 422 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 RGS21Q2M5E4 152 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 ZNF484Q5JVG2 852 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 CERCAMQ5T4B2 595 aa16.17■□□□□ 0.18
CHMP1A-201ENST00000397901 EGFLAMQ63HQ2 1017 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms