RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 KLHDC8BQ8IXV7 354 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 PRCCQ92733 491 aaPredicted RBP17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 CHFRQ96EP1 664 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 IRF2BPLQ9H1B7 796 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 NT5MQ9NPB1 228 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 SHOC2Q9UQ13 582 aa17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 MUC22E2RYF6 1773 aaPredicted RBP17.21■□□□□ 0.34
TSPAN4-205ENST00000397406 CCDC151A5D8V7 595 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 PRR23AA6NEV1 266 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 FAM170BA6NMN3 283 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 F5H423 210 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 MUSKO15146 869 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 GFRA3O60609 400 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 TMEM63AO94886 807 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 H2AFXP16104 143 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 GJA4P35212 333 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 OPRD1P41143 372 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 SLC6A11P48066 632 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 PFKPQ01813 784 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 ZNF235Q14590 738 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 BRD3Q15059 726 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 GEN1Q17RS7 908 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 ITPRIPL2Q3MIP1 535 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 INO80DQ53TQ3 878 aaPredicted RBP17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 RETSATQ6NUM9 610 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 AHI1Q8N157 1196 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 PHTF2Q8N3S3 785 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 TTC8Q8TAM2 541 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.2■□□□□ 0.347e-6■■□□□ 11.7
TSPAN4-205ENST00000397406 EXOC4Q96A65 974 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 TTC17Q96AE7 1141 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 PSKH2Q96QS6 385 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 FCRL5Q96RD9 977 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 BRD9Q9H8M2 597 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 SEPT3Q9UH03 358 aa17.2■□□□□ 0.34
TSPAN4-205ENST00000397406 NEBLO76041 1014 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 TMCC1O94876 653 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 MT-CO1P00395 513 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 TPSB2P20231 275 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 CTSOP43234 321 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 SERPINH1P50454 418 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 GEMIN4P57678 1058 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 MAXP61244 160 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 MESP2Q0VG99 397 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 UBXN2BQ14CS0 331 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 TPSAB1Q15661 275 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 SYCP2LQ5T4T6 812 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 ALG1LQ6GMV1 187 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 C1orf210Q8IVY1 113 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 TSEN2Q8NCE0 465 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 WFIKKN2Q8TEU8 576 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 AENQ8WTP8 325 aaKnown RBP17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 DNASE1L2Q92874 299 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 CLDN23Q96B33 292 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 SHDQ96IW2 340 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 CFAP54Q96N23 3096 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 MGME1Q9BQP7 344 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 MLPHQ9BV36 600 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 CINPQ9BW66 212 aaPredicted RBP17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 TTLL3Q9Y4R7 772 aa17.19■□□□□ 0.34
TSPAN4-205ENST00000397406 SMAPO00193 183 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 FAM153BP0C7A2 387 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 SP9P0CG40 484 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 SULT2A1Q06520 285 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 SLC20A2Q08357 652 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 NIPAL4Q0D2K0 466 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 FAM153CQ494X1 144 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 MBLAC2Q68D91 279 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 KCTD11Q693B1 232 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 NAIF1Q69YI7 327 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 GRAMD4Q6IC98 578 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 BBS5Q8N3I7 341 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 SPATA22Q8NHS9 363 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 ARRDC2Q8TBH0 407 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 IMP4Q96G21 291 aaKnown RBP17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 OXNAD1Q96HP4 312 aaPredicted RBP17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 FMO2Q99518 471 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 OSBPL6Q9BZF3 934 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 SLC25A51Q9H1U9 297 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 TRPV5Q9NQA5 729 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 EIF2B3Q9NR50 452 aaKnown RBP17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 DEC1Q9P2X7 70 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 LHX3Q9UBR4 397 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 FAM153AQ9UHL3 310 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 HS3ST2Q9Y278 367 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 R4GN57 208 aa17.18■□□□□ 0.34
TSPAN4-205ENST00000397406 K7ERQ8 282 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 DYNC1I1O14576 645 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 APRTP07741 180 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 MMP2P08253 660 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 CR2P20023 1033 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 EIF2DP41214 584 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 RGRP47804 291 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 STK19P49842 368 aaPredicted RBP17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 ECT2LQ008S8 904 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 DSC2Q02487 901 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 KDSRQ06136 332 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 IHHQ14623 411 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 FBXO38Q6PIJ6 1188 aa17.17■□□□□ 0.34
TSPAN4-205ENST00000397406 PRPF39Q86UA1 669 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms