RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 CASKIN2Q8WXE0 1202 aa13.5□□□□□ -0.25
SEC13-209ENST00000397117 SEC14L1Q92503 715 aa13.5□□□□□ -0.25
SEC13-209ENST00000397117 LRRC45Q96CN5 670 aa13.5□□□□□ -0.25
SEC13-209ENST00000397117 P2RY11Q96G91 374 aa13.5□□□□□ -0.25
SEC13-209ENST00000397117 SNF8Q96H20 258 aa13.5□□□□□ -0.25
SEC13-209ENST00000397117 RAB21Q9UL25 225 aa13.5□□□□□ -0.25
SEC13-209ENST00000397117 NEU2Q9Y3R4 380 aa13.5□□□□□ -0.25
SEC13-209ENST00000397117 PKD1L2Q7Z442 2459 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 ANTXRLA6NF34 631 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 RASA4BC9J798 803 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 H0Y626 953 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 K7EQS6 105 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 KHNYNO15037 678 aaKnown RBP13.49□□□□□ -0.25
SEC13-209ENST00000397117 RASA4O43374 803 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 ERLIN1O75477 346 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 TOP3BO95985 862 aaKnown RBP13.49□□□□□ -0.25
SEC13-209ENST00000397117 ZSCAN5DPP0CG00 497 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 ETS1P14921 441 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 H2AFXP16104 143 aaPredicted RBP13.49□□□□□ -0.25
SEC13-209ENST00000397117 TNFRSF8P28908 595 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 OPRD1P41143 372 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 PAPOLAP51003 745 aaKnown RBP13.49□□□□□ -0.25
SEC13-209ENST00000397117 DRG2P55039 364 aaKnown RBP13.49□□□□□ -0.25
SEC13-209ENST00000397117 YBEYP58557 167 aaPredicted RBP13.49□□□□□ -0.25
SEC13-209ENST00000397117 ZNF33AQ06730 810 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 FOXC1Q12948 553 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 NR1H3Q13133 447 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 P3H1Q32P28 736 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 TIGD7Q6NT04 549 aaPredicted RBP13.49□□□□□ -0.25
SEC13-209ENST00000397117 TPGS1Q6ZTW0 290 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 PRUNE1Q86TP1 453 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 CCDC13Q8IYE1 715 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 CARNMT1Q8N4J0 409 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 GLIS1Q8NBF1 620 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 BBOF1Q8ND07 529 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 BHMTQ93088 406 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 RTP4Q96DX8 246 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 TMEM9BQ9NQ34 198 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 ZNF212Q9UDV6 495 aa13.49□□□□□ -0.25
SEC13-209ENST00000397117 CACNA1EQ15878 2313 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 PLXND1Q9Y4D7 1925 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 PATE3B3GLJ2 98 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 RNF103O00237 685 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 NDC80O14777 642 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 RHOCP08134 193 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 VAV1P15498 845 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 SPINK2P20155 84 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 BCKDHBP21953 392 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 CCNCP24863 283 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 RPL21P46778 160 aaKnown RBP13.48□□□□□ -0.25
SEC13-209ENST00000397117 CARSP49589 748 aaKnown RBP13.48□□□□□ -0.25
SEC13-209ENST00000397117 IRX4P78413 519 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 CDH18Q13634 790 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 BRD3Q15059 726 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 TRADDQ15628 312 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 GAB4Q2WGN9 574 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 MPP7Q5T2T1 576 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 C4orf22Q6V702 233 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 CCNI2Q6ZMN8 369 aaPredicted RBP13.48□□□□□ -0.25
SEC13-209ENST00000397117 ARHGEF18Q6ZSZ5 1173 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 SETD3Q86TU7 594 aaPredicted RBP13.48□□□□□ -0.25
SEC13-209ENST00000397117 KIAA1958Q8N8K9 716 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 OTUB2Q96DC9 234 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 HMCESQ96FZ2 354 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 TSGA13Q96PP4 275 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 TPSD1Q9BZJ3 242 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 MAGEH1Q9H213 219 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 NOL6Q9H6R4 1146 aaKnown RBP13.48□□□□□ -0.25
SEC13-209ENST00000397117 WHRNQ9P202 907 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 PAK5Q9P286 719 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 IPO11Q9UI26 975 aaKnown RBP13.48□□□□□ -0.25
SEC13-209ENST00000397117 CEP192Q8TEP8 1941 aa13.48□□□□□ -0.25
SEC13-209ENST00000397117 ILVBLA1L0T0 632 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 C5orf60A6NFR6 353 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 BHMG1C9JSJ3 638 aaPredicted RBP13.47□□□□□ -0.25
SEC13-209ENST00000397117 KCNK1O00180 336 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 GFRA2O00451 464 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 GCATO75600 419 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 NEBLO76041 1014 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 LUC7L3O95232 432 aaKnown RBP13.47□□□□□ -0.25
SEC13-209ENST00000397117 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
SEC13-209ENST00000397117 ITIH2P19823 946 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 RPL22P35268 128 aaKnown RBP13.47□□□□□ -0.25
SEC13-209ENST00000397117 ETFBP38117 255 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 CLCN6P51797 869 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 GNA12Q03113 381 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 ANO4Q32M45 955 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 MAP9Q49MG5 647 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 C2orf27AQ580R0 203 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 ARHGAP36Q6ZRI8 547 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 MTERF4Q7Z6M4 381 aaKnown RBP13.47□□□□□ -0.25
SEC13-209ENST00000397117 MFN1Q8IWA4 741 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 CCDC110Q8TBZ0 833 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 NSMCE1Q8WV22 266 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 GATA6Q92908 595 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 MUC3BQ9H195 1237 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 SP110Q9HB58 689 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 MMP17Q9ULZ9 603 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 NFU1Q9UMS0 254 aa13.47□□□□□ -0.25
SEC13-209ENST00000397117 TBC1D30Q9Y2I9 924 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms