RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 FNDC1Q4ZHG4 1894 aaPredicted RBP14.11□□□□□ -0.15
NUP98-204ENST00000397004 KPNA7A9QM74 516 aa14.11□□□□□ -0.15
NUP98-204ENST00000397004 BTBD19C9JJ37 291 aa14.11□□□□□ -0.15
NUP98-204ENST00000397004 TMCC1O94876 653 aa14.11□□□□□ -0.15
NUP98-204ENST00000397004 ADRA1BP35368 520 aa14.11□□□□□ -0.15
NUP98-204ENST00000397004 STT3AP46977 705 aa14.11□□□□□ -0.15
NUP98-204ENST00000397004 SULT2A1Q06520 285 aa14.11□□□□□ -0.15
NUP98-204ENST00000397004 FRG1Q14331 258 aaKnown RBP14.11□□□□□ -0.15
NUP98-204ENST00000397004 DENND5AQ6IQ26 1287 aa14.11□□□□□ -0.15
NUP98-204ENST00000397004 LRRC8EQ6NSJ5 796 aa14.11□□□□□ -0.15
NUP98-204ENST00000397004 ZFP1Q6P2D0 407 aa14.11□□□□□ -0.15
NUP98-204ENST00000397004 CYP2R1Q6VVX0 501 aa14.11□□□□□ -0.15
NUP98-204ENST00000397004 CELF6Q96J87 481 aaKnown RBP14.11□□□□□ -0.15
NUP98-204ENST00000397004 RANBP9Q96S59 729 aa14.11□□□□□ -0.15
NUP98-204ENST00000397004 CIB1Q99828 191 aa14.11□□□□□ -0.15
NUP98-204ENST00000397004 BFARQ9NZS9 450 aa14.11□□□□□ -0.15
NUP98-204ENST00000397004 FOXD2O60548 495 aaPredicted RBP14.1□□□□□ -0.15
NUP98-204ENST00000397004 CABYRO75952 493 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 HSPA1AP0DMV8 641 aaKnown RBP14.1□□□□□ -0.15
NUP98-204ENST00000397004 HSPA1BP0DMV9 641 aaKnown RBP14.1□□□□□ -0.15
NUP98-204ENST00000397004 USP10Q14694 798 aaKnown RBP14.1□□□□□ -0.15
NUP98-204ENST00000397004 RFTN1Q14699 578 aaPredicted RBP14.1□□□□□ -0.15
NUP98-204ENST00000397004 LCA5Q86VQ0 697 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 ADAMTS10Q9H324 1103 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 RHBDL2Q9NX52 303 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 CDYLQ9Y232 598 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 FIS1Q9Y3D6 152 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 RALGAPA2Q2PPJ7 1873 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 CROCCQ5TZA2 2017 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 PDCD11Q14690 1871 aaKnown RBP14.1□□□□□ -0.15
NUP98-204ENST00000397004 UBFD1O14562 309 aaKnown RBP14.1□□□□□ -0.15
NUP98-204ENST00000397004 TRMUO75648 421 aaKnown RBP14.1□□□□□ -0.15
NUP98-204ENST00000397004 C8BP07358 591 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 ALDH3B2P48448 385 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 TXNL4AP83876 142 aaKnown RBP14.1□□□□□ -0.15
NUP98-204ENST00000397004 ANO4Q32M45 955 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 SH2D4BQ5SQS7 431 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 ESRP1Q6NXG1 681 aaKnown RBP14.1□□□□□ -0.15
NUP98-204ENST00000397004 CLEC20AQ6ZU45 233 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 CHSY3Q70JA7 882 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 CCNYL1Q8N7R7 359 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 ARRDC4Q8NCT1 418 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 TMEM40Q8WWA1 233 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 SLC2A13Q96QE2 648 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 SERPINI1Q99574 410 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 FAM124BQ9H5Z6 455 aaPredicted RBP14.1□□□□□ -0.15
NUP98-204ENST00000397004 CACNA2D2Q9NY47 1150 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 CD300AQ9UGN4 299 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 SOCS2O14508 198 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 DAB1O75553 588 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 RECQL4O94761 1208 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 UGT1A6P19224 532 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 NOS2P35228 1153 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 PRKAA1Q13131 559 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 LAMC2Q13753 1193 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 ZNF484Q5JVG2 852 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 BORAQ6PGQ7 559 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 BHLHA9Q7RTU4 235 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 ASB9Q96DX5 294 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 ZFRQ96KR1 1074 aaKnown RBP14.1□□□□□ -0.15
NUP98-204ENST00000397004 HSFY1Q96LI6 401 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 EFCAB1Q9HAE3 211 aa14.1□□□□□ -0.15
NUP98-204ENST00000397004 MT-CO1P00395 513 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 KCNC1P48547 511 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 PSMD8P48556 350 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 PSME3P61289 254 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 MAP7Q14244 749 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 PTK2BQ14289 1009 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 HERC3Q15034 1050 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 DGKDQ16760 1214 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 ELMSAN1Q6PJG2 1045 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 LRRC52Q8N7C0 313 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 LPGAT1Q92604 370 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 HSPBAP1Q96EW2 488 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 NOL11Q9H8H0 719 aaKnown RBP14.09□□□□□ -0.15
NUP98-204ENST00000397004 FBRSL1Q9HCM7 1045 aaKnown RBP14.09□□□□□ -0.15
NUP98-204ENST00000397004 ADA2Q9NZK5 511 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 NEU3Q9UQ49 428 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 XPO1O14980 1071 aaKnown RBP14.09□□□□□ -0.15
NUP98-204ENST00000397004 TIMM44O43615 452 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 TRIM25Q14258 630 aaKnown RBP14.09□□□□□ -0.15
NUP98-204ENST00000397004 FBXO47Q5MNV8 452 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 C8orf82Q6P1X6 216 aaPredicted RBP14.09□□□□□ -0.15
NUP98-204ENST00000397004 TTC39CQ8N584 583 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 USP33Q8TEY7 942 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 HEXDCQ8WVB3 486 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 RPL10LQ96L21 214 aaKnown RBP14.09□□□□□ -0.15
NUP98-204ENST00000397004 MUC3BQ9H195 1237 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 RHOJQ9H4E5 214 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 GPRC5DQ9NZD1 345 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 SMIM28A0A1B0GU29 152 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 DDHD2O94830 711 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 JCHAINP01591 159 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 YWHAQP27348 245 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 CSE1LP55060 971 aaKnown RBP14.09□□□□□ -0.15
NUP98-204ENST00000397004 TAS2R39P59534 338 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 ART3Q13508 389 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 NHSL2Q5HYW2 709 aa14.09□□□□□ -0.15
NUP98-204ENST00000397004 RBM20Q5T481 1227 aaKnown RBP14.09□□□□□ -0.15
NUP98-204ENST00000397004 WNT8BQ93098 351 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms