RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 STMN1P16949 149 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 PTPN4P29074 926 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 AQP5P55064 265 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 KCNJ2P63252 427 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 IL31Q6EBC2 164 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 ZCCHC23Q6ZST2 131 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 TMEM173Q86WV6 379 aaPredicted RBP16.34■□□□□ 0.21
SNX6-202ENST00000396526 AZIN2Q96A70 460 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 PLD4Q96BZ4 506 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 TMEM237Q96Q45 408 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 TASP1Q9H6P5 420 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 TMEM39AQ9NV64 488 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 APOBEC2Q9Y235 224 aaKnown RBP16.34■□□□□ 0.21
SNX6-202ENST00000396526 ETFBP38117 255 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 PPP3CCP48454 512 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 MAXP61244 160 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 PRAMEP78395 509 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 GRM3Q14832 879 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 TBCCQ15814 346 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 KDELC1Q6UW63 502 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 ASRGL1Q7L266 308 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 C10orf107Q8IVU9 208 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 CNTN4Q8IWV2 1026 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 LMNTD2Q8IXW0 634 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 CRIPAKQ8N1N5 446 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 TEX26Q8N6G2 289 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 ZNF778Q96MU6 729 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 RANBP9Q96S59 729 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 SPON2Q9BUD6 331 aa16.34■□□□□ 0.21
SNX6-202ENST00000396526 MARCOQ9UEW3 520 aaPredicted RBP16.34■□□□□ 0.21
SNX6-202ENST00000396526 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.33■□□□□ 0.2
SNX6-202ENST00000396526 TRIM13O60858 407 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 PAPSS2O95340 614 aaPredicted RBP16.33■□□□□ 0.2
SNX6-202ENST00000396526 ATF6P18850 670 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 CALB2P22676 271 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 RFC2P35250 354 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 CDH4P55283 916 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 ZNF177Q13360 481 aaPredicted RBP16.33■□□□□ 0.2
SNX6-202ENST00000396526 MBLAC2Q68D91 279 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 ARHGAP24Q8N264 748 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 UXTQ9UBK9 157 aaPredicted RBP16.33■□□□□ 0.2
SNX6-202ENST00000396526 FBXO5Q9UKT4 447 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 DNAJC16Q9Y2G8 782 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 CLDN11O75508 207 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 HSPA4LO95757 839 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 TOP3BO95985 862 aaKnown RBP16.33■□□□□ 0.2
SNX6-202ENST00000396526 SOD2P04179 222 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 SERPINF2P08697 491 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 ITGA9Q13797 1035 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 KRT72Q14CN4 511 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 ZNF470Q6ECI4 717 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 TSPAN17Q96FV3 270 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 SEPT3Q9UH03 358 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 EMCNQ9ULC0 261 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 SORCS3Q9UPU3 1222 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 MYO16Q9Y6X6 1858 aa16.33■□□□□ 0.2
SNX6-202ENST00000396526 FCHO1O14526 889 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 PRRG1O14668 218 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 URODP06132 367 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 RPL17P18621 184 aaKnown RBP16.32■□□□□ 0.2
SNX6-202ENST00000396526 HLA-DPA1P20036 260 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 KCNQ1P51787 676 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 DSC2Q02487 901 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 TSNAXIP1Q2TAA8 658 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 SCG3Q8WXD2 468 aaKnown RBP16.32■□□□□ 0.2
SNX6-202ENST00000396526 SEMA3CQ99985 751 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 CAB39LQ9H9S4 337 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 KCNK13Q9HB14 408 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 ZNF840PA6NDX5 716 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 PRAMEF11O60813 436 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 CBX6O95503 412 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 AHSGP02765 367 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 ABCE1P61221 599 aaKnown RBP16.32■□□□□ 0.2
SNX6-202ENST00000396526 PCLAFQ15004 111 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 TSTD2Q5T7W7 516 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 SNX30Q5VWJ9 437 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNX6-202ENST00000396526 OR6P1Q8NGX9 317 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 LNPEPQ9UIQ6 1025 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 ABHD14A-ACY1A0A1B0GW23 586 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 FAM95CA0A1B0GW59 222 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 TYW5A2RUC4 315 aaKnown RBP16.32■□□□□ 0.2
SNX6-202ENST00000396526 PEX11BO96011 259 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 EPOP01588 193 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 FGF3P11487 239 aaPredicted RBP16.32■□□□□ 0.2
SNX6-202ENST00000396526 CHRNA4P43681 627 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 ABCG1P45844 678 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 OXCT1P55809 520 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 RAB10P61026 200 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 GNA12Q03113 381 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 TNK2Q07912 1038 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 CTBP1Q13363 440 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 TRIM60Q495X7 471 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 GPATCH11Q8N954 259 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 TTC8Q8TAM2 541 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 SKA1Q96BD8 255 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 ELMO2Q96JJ3 720 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 RUVBL2Q9Y230 463 aaKnown RBP16.32■□□□□ 0.2
SNX6-202ENST00000396526 ATP11BQ9Y2G3 1177 aa16.32■□□□□ 0.2
SNX6-202ENST00000396526 E2F8A0AVK6 867 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms