RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 INSIG1O15503 277 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 IGSF6O95976 241 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 CISD3P0C7P0 127 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 GJA4P35212 333 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 CSNK1DP48730 415 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 SCNN1BP51168 640 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 PMS2P54278 862 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 MAXP61244 160 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 AP1S1P61966 158 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 SNRPD1P62314 119 aaKnown RBP13.87□□□□□ -0.19
VAPB-202ENST00000395802 RAD51Q06609 339 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 CDH17Q12864 832 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 GRM3Q14832 879 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 CYTH1Q15438 398 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 UAP1Q16222 522 aaPredicted RBP13.87□□□□□ -0.19
VAPB-202ENST00000395802 LINGO4Q6UY18 593 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 LEKR1Q6ZMV7 388 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 ADIPOR2Q86V24 386 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 KDM1BQ8NB78 822 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 GTSE1Q9NYZ3 720 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 BFARQ9NZS9 450 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.87□□□□□ -0.19
VAPB-202ENST00000395802 MAGEB16A2A368 324 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 SDR42E2A6NKP2 422 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 C2CD4DB7Z1M9 353 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 E7ESA3 106 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 AGPSO00116 658 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 ALOX15BO15296 676 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 DLDP09622 509 aaKnown RBP13.87□□□□□ -0.19
VAPB-202ENST00000395802 CD86P42081 329 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 RECQLP46063 649 aaPredicted RBP13.87□□□□□ -0.19
VAPB-202ENST00000395802 PFKPQ01813 784 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 PDIA2Q13087 525 aaKnown RBP13.87□□□□□ -0.19
VAPB-202ENST00000395802 CFAP58Q5T655 872 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 ZBED8Q8IZ13 594 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 IQCKQ8N0W5 287 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 SH2D3CQ8N5H7 860 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 PCDH20Q8N6Y1 951 aaKnown RBP13.87□□□□□ -0.19
VAPB-202ENST00000395802 IPMKQ8NFU5 416 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 PYROXD1Q8WU10 500 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 IFT43Q96FT9 208 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 ZNF419Q96HQ0 510 aaPredicted RBP13.87□□□□□ -0.19
VAPB-202ENST00000395802 TBL1YQ9BQ87 522 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 CIPCQ9C0C6 399 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 PABPC3Q9H361 631 aaKnown RBP13.87□□□□□ -0.19
VAPB-202ENST00000395802 SAYSD1Q9NPB0 183 aa13.87□□□□□ -0.19
VAPB-202ENST00000395802 TCRBV7S3A2A0A539 114 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 TBC1D3BA6NDS4 549 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 H3BQF6 201 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 SPAG6O75602 509 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 CD160O95971 181 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 MT-CYBP00156 380 aaPredicted RBP13.86□□□□□ -0.19
VAPB-202ENST00000395802 TSHRP16473 764 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 SP100P23497 879 aaPredicted RBP13.86□□□□□ -0.19
VAPB-202ENST00000395802 PHBP35232 272 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 HSD17B3P37058 310 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 MAGEA4P43358 317 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 NPY2RP49146 381 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 LAMB3Q13751 1172 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 ACCSLQ4AC99 568 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 CCDC38Q502W7 563 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 SYCP2LQ5T4T6 812 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 ALS2CLQ60I27 953 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 ASTLQ6HA08 431 aaPredicted RBP13.86□□□□□ -0.19
VAPB-202ENST00000395802 PTCRAQ6ISU1 281 aaPredicted RBP13.86□□□□□ -0.19
VAPB-202ENST00000395802 PGBD5Q8N414 524 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.86□□□□□ -0.19
VAPB-202ENST00000395802 TERB1Q8NA31 727 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 SPATA22Q8NHS9 363 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 ARRDC2Q8TBH0 407 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 DNASE1L2Q92874 299 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 MSANTD3Q96H12 275 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 OXNAD1Q96HP4 312 aaPredicted RBP13.86□□□□□ -0.19
VAPB-202ENST00000395802 MLPHQ9BV36 600 aaPredicted RBP13.86□□□□□ -0.19
VAPB-202ENST00000395802 IL22Q9GZX6 179 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 KCNK12Q9HB15 430 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 ELOVL2Q9NXB9 296 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 UBP1Q9NZI7 540 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 ERVW-1Q9UQF0 538 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 FCF1Q9Y324 198 aaKnown RBP13.86□□□□□ -0.19
VAPB-202ENST00000395802 KIF26AQ9ULI4 1882 aaPredicted RBP13.86□□□□□ -0.19
VAPB-202ENST00000395802 MYOFQ9NZM1 2061 aa13.86□□□□□ -0.19
VAPB-202ENST00000395802 OTOL1A6NHN0 477 aaPredicted RBP13.85□□□□□ -0.19
VAPB-202ENST00000395802 F5H423 210 aaPredicted RBP13.85□□□□□ -0.19
VAPB-202ENST00000395802 ARNTLO00327 626 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 NPC1O15118 1278 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 RRP9O43818 475 aaKnown RBP13.85□□□□□ -0.19
VAPB-202ENST00000395802 PMPCBO75439 489 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 GSRP00390 522 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 APODP05090 189 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 SRCP12931 536 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 CR2P20023 1033 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 GRIA2P42262 883 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 WNT3AP56704 352 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 DSC2Q02487 901 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 GEN1Q17RS7 908 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 BBS9Q3SYG4 887 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 DENND2CQ68D51 928 aa13.85□□□□□ -0.19
VAPB-202ENST00000395802 PRPF39Q86UA1 669 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms