RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 TMEM120BA0PK00 339 aa19.59■□□□□ 0.73
LMNB1-202ENST00000395354 MAGEB16A2A368 324 aa19.59■□□□□ 0.73
LMNB1-202ENST00000395354 FAM159BA6NKW6 160 aa19.59■□□□□ 0.73
LMNB1-202ENST00000395354 LATS1O95835 1130 aa19.59■□□□□ 0.73
LMNB1-202ENST00000395354 INHBAP08476 426 aa19.59■□□□□ 0.73
LMNB1-202ENST00000395354 PSMC3P17980 439 aa19.59■□□□□ 0.73
LMNB1-202ENST00000395354 MGAT1P26572 445 aa19.59■□□□□ 0.73
LMNB1-202ENST00000395354 EFTUD2Q15029 972 aaKnown RBP eCLIP19.59■□□□□ 0.73
LMNB1-202ENST00000395354 RABGAP1LQ5R372 815 aa19.59■□□□□ 0.73
LMNB1-202ENST00000395354 TFAP2DQ7Z6R9 452 aa19.59■□□□□ 0.73
LMNB1-202ENST00000395354 LRRC6Q86X45 466 aa19.59■□□□□ 0.73
LMNB1-202ENST00000395354 TTC17Q96AE7 1141 aa19.59■□□□□ 0.73
LMNB1-202ENST00000395354 DDX50Q9BQ39 737 aaKnown RBP19.59■□□□□ 0.73
LMNB1-202ENST00000395354 BFARQ9NZS9 450 aa19.59■□□□□ 0.73
LMNB1-202ENST00000395354 STOML2Q9UJZ1 356 aa19.59■□□□□ 0.73
LMNB1-202ENST00000395354 SMG5Q9UPR3 1016 aaKnown RBP19.59■□□□□ 0.73
LMNB1-202ENST00000395354 SLC9A3R1O14745 358 aaPredicted RBP19.58■□□□□ 0.73
LMNB1-202ENST00000395354 PRPF4O43172 522 aaKnown RBP eCLIP19.58■□□□□ 0.73
LMNB1-202ENST00000395354 RAMP2O60895 175 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 GEMP55040 296 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 SESN2P58004 480 aaPredicted RBP19.58■□□□□ 0.73
LMNB1-202ENST00000395354 FCHO2Q0JRZ9 810 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 NAB1Q13506 487 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 FRG1Q14331 258 aaKnown RBP19.58■□□□□ 0.73
LMNB1-202ENST00000395354 FAM133BQ5BKY9 247 aaKnown RBP19.58■□□□□ 0.73
LMNB1-202ENST00000395354 LGSNQ5TDP6 509 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 YAF2Q8IY57 180 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 LGI2Q8N0V4 545 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 HMCESQ96FZ2 354 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 SMC6Q96SB8 1091 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 TRABDQ9H4I3 376 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 KCNK12Q9HB15 430 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 RBM22Q9NW64 420 aaKnown RBP eCLIP19.58■□□□□ 0.73
LMNB1-202ENST00000395354 DUS2Q9NX74 493 aaKnown RBP19.58■□□□□ 0.73
LMNB1-202ENST00000395354 PRKAG3Q9UGI9 489 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 WNT6Q9Y6F9 365 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 DOCK4Q8N1I0 1966 aa19.58■□□□□ 0.73
LMNB1-202ENST00000395354 MYO10Q9HD67 2058 aa19.58■□□□□ 0.72
LMNB1-202ENST00000395354 COL6A3P12111 3177 aa19.58■□□□□ 0.72
LMNB1-202ENST00000395354 GMNCA6NCL1 334 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 LOC730098B7Z3J9 87 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 FAM155BO75949 473 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 NEBLO76041 1014 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 PEX11BO96011 259 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 CDH4P55283 916 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 IL10RBQ08334 325 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 GRM2Q14416 872 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 POLD3Q15054 466 aaPredicted RBP19.57■□□□□ 0.72
LMNB1-202ENST00000395354 SPANXN3Q5MJ09 141 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 ARMC3Q5W041 872 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 CASC4Q6P4E1 433 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 PRPF39Q86UA1 669 aaKnown RBP19.57■□□□□ 0.72
LMNB1-202ENST00000395354 ADHFE1Q8IWW8 467 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 ADGRG2Q8IZP9 1017 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 TEX26Q8N6G2 289 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 OR52K1Q8NGK4 314 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 BCAS4Q8TDM0 211 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 USP33Q8TEY7 942 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 MZB1Q8WU39 189 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 NSMCE1Q8WV22 266 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 OSCP1Q8WVF1 389 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 NXPE3Q969Y0 559 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 ALKBH8Q96BT7 664 aaKnown RBP19.57■□□□□ 0.72
LMNB1-202ENST00000395354 OXNAD1Q96HP4 312 aaPredicted RBP19.57■□□□□ 0.72
LMNB1-202ENST00000395354 TRMT61BQ9BVS5 477 aaKnown RBP19.57■□□□□ 0.72
LMNB1-202ENST00000395354 KCNK9Q9NPC2 374 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 NKIRAS1Q9NYS0 192 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 SAMD15Q9P1V8 674 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 NUP205Q92621 2012 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 POLBP06746 335 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 CREB1P16220 341 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 OR1E1P30953 314 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 CDH17Q12864 832 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 SERINC3Q13530 473 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 SPARCL1Q14515 664 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 CCDC117Q8IWD4 279 aaPredicted RBP19.57■□□□□ 0.72
LMNB1-202ENST00000395354 DNAAF3Q8N9W5 541 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 OTUB2Q96DC9 234 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 SGSM3Q96HU1 749 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 ZFYVE19Q96K21 471 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 ASB2Q96Q27 587 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 SP110Q9HB58 689 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 SYBUQ9NX95 663 aa19.57■□□□□ 0.72
LMNB1-202ENST00000395354 NYNRINQ9P2P1 1898 aaKnown RBP19.56■□□□□ 0.72
LMNB1-202ENST00000395354 FAM47DPA6NHR8 397 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 HLA-DQB2P05538 268 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 BMP1P13497 986 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 SLC6A4P31645 630 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 SERPINB9P50453 376 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 MARC1Q5VT66 337 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 TTC39BQ5VTQ0 682 aaPredicted RBP19.56■□□□□ 0.72
LMNB1-202ENST00000395354 RFWD3Q6PCD5 774 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 CHST9Q7L1S5 443 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 FAM217AQ8IXS0 508 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 PPM1NQ8N819 430 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 MRRFQ96E11 262 aaKnown RBP19.56■□□□□ 0.72
LMNB1-202ENST00000395354 ZNF599Q96NL3 588 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 FAM83CQ9BQN1 747 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 IL22Q9GZX6 179 aa19.56■□□□□ 0.72
LMNB1-202ENST00000395354 SLC25A51Q9H1U9 297 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms