RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 NIPAL4Q0D2K0 466 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 RFTN1Q14699 578 aaPredicted RBP24.9■■□□□ 1.58
CTF1-202ENST00000395019 MPPE1Q53F39 396 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 KDELC1Q6UW63 502 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 CYP4X1Q8N118 509 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 PGBD5Q8N414 524 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 CARNMT1Q8N4J0 409 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 TTC16Q8NEE8 873 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 IPMKQ8NFU5 416 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 RIN3Q8TB24 985 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 APOL2Q9BQE5 337 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 MAXP61244 160 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 ITKQ08881 620 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 NR1H3Q13133 447 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 KBTBD12Q3ZCT8 623 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 LEXMQ3ZCV2 418 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 ADGRD1Q6QNK2 874 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 LEKR1Q6ZMV7 388 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 TAOK1Q7L7X3 1001 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 EXOC3L1Q86VI1 746 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 BBS5Q8N3I7 341 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 USP13Q92995 863 aaPredicted RBP24.9■■□□□ 1.58
CTF1-202ENST00000395019 TADA1Q96BN2 335 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 MRGPRX2Q96LB1 330 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 PAFAH2Q99487 392 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 TRIM56Q9BRZ2 755 aaKnown RBP24.9■■□□□ 1.58
CTF1-202ENST00000395019 IL22Q9GZX6 179 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 MUC3BQ9H195 1237 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 HAUS2Q9NVX0 235 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 SAMD15Q9P1V8 674 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 UBA2Q9UBT2 640 aaPredicted RBP24.9■■□□□ 1.58
CTF1-202ENST00000395019 TBK1Q9UHD2 729 aa24.9■■□□□ 1.58
CTF1-202ENST00000395019 ALDH1A2O94788 518 aa24.89■■□□□ 1.57
CTF1-202ENST00000395019 MSH2P43246 934 aa24.89■■□□□ 1.57
CTF1-202ENST00000395019 ZNF235Q14590 738 aa24.89■■□□□ 1.57
CTF1-202ENST00000395019 TMED2Q15363 201 aa24.89■■□□□ 1.57
CTF1-202ENST00000395019 FSCBQ5H9T9 825 aa24.89■■□□□ 1.57
CTF1-202ENST00000395019 RNF43Q68DV7 783 aa24.89■■□□□ 1.57
CTF1-202ENST00000395019 ARRDC2Q8TBH0 407 aa24.89■■□□□ 1.57
CTF1-202ENST00000395019 FICDQ9BVA6 458 aa24.89■■□□□ 1.57
CTF1-202ENST00000395019 POLR1EQ9GZS1 481 aaKnown RBP24.89■■□□□ 1.57
CTF1-202ENST00000395019 TDP1Q9NUW8 608 aa24.89■■□□□ 1.57
CTF1-202ENST00000395019 MOCS1Q9NZB8 636 aa24.89■■□□□ 1.57
CTF1-202ENST00000395019 SEPT3Q9UH03 358 aa24.89■■□□□ 1.57
CTF1-202ENST00000395019 CDH7Q9ULB5 785 aa24.89■■□□□ 1.57
CTF1-202ENST00000395019 MAGEB16A2A368 324 aa24.88■■□□□ 1.57
CTF1-202ENST00000395019 PMPCBO75439 489 aa24.88■■□□□ 1.57
CTF1-202ENST00000395019 MMP2P08253 660 aa24.88■■□□□ 1.57
CTF1-202ENST00000395019 ATP1A2P50993 1020 aa24.88■■□□□ 1.57
CTF1-202ENST00000395019 WNT3AP56704 352 aa24.88■■□□□ 1.57
CTF1-202ENST00000395019 DSC2Q02487 901 aa24.88■■□□□ 1.57
CTF1-202ENST00000395019 ALG1LQ6GMV1 187 aa24.88■■□□□ 1.57
CTF1-202ENST00000395019 DENND5AQ6IQ26 1287 aa24.88■■□□□ 1.57
CTF1-202ENST00000395019 RANBP10Q6VN20 620 aa24.88■■□□□ 1.57
CTF1-202ENST00000395019 CCDC117Q8IWD4 279 aaPredicted RBP24.88■■□□□ 1.57
CTF1-202ENST00000395019 DDI1Q8WTU0 396 aa24.88■■□□□ 1.57
CTF1-202ENST00000395019 SLC44A1Q8WWI5 657 aa24.88■■□□□ 1.57
CTF1-202ENST00000395019 NECTIN4Q96NY8 510 aa24.88■■□□□ 1.57
CTF1-202ENST00000395019 OR51B4Q9Y5P0 310 aa24.88■■□□□ 1.57
CTF1-202ENST00000395019 FAM159BA6NKW6 160 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 TCF3P15923 654 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 GLDCP23378 1020 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 CD86P42081 329 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 CDH18Q13634 790 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 FAM78AQ5JUQ0 283 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 SPANXN3Q5MJ09 141 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 CERCAMQ5T4B2 595 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 ARID3BQ8IVW6 561 aaPredicted RBP24.87■■□□□ 1.57
CTF1-202ENST00000395019 DCAKDQ8WVC6 231 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 TTC17Q96AE7 1141 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 RSPRY1Q96DX4 576 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 PSKH2Q96QS6 385 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 MGME1Q9BQP7 344 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 FSD1LQ9BXM9 530 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 PSD3Q9NYI0 1048 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 ACTL7BQ9Y614 415 aa24.87■■□□□ 1.57
CTF1-202ENST00000395019 MUSKO15146 869 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 POLBP06746 335 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 MZF1P28698 734 aaPredicted RBP24.86■■□□□ 1.57
CTF1-202ENST00000395019 GBP2P32456 591 aaPredicted RBP24.86■■□□□ 1.57
CTF1-202ENST00000395019 CRYMQ14894 314 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 TERF2Q15554 542 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 PTCRAQ6ISU1 281 aaPredicted RBP24.86■■□□□ 1.57
CTF1-202ENST00000395019 TRMT10BQ6PF06 316 aaKnown RBP24.86■■□□□ 1.57
CTF1-202ENST00000395019 TMEM135Q86UB9 458 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 MFN1Q8IWA4 741 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 MRRFQ96E11 262 aaKnown RBP24.86■■□□□ 1.57
CTF1-202ENST00000395019 ALG14Q96F25 216 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 ASB16Q96NS5 453 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 FEM1AQ9BSK4 669 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 CNOT10Q9H9A5 744 aaKnown RBP24.86■■□□□ 1.57
CTF1-202ENST00000395019 ARNT2Q9HBZ2 717 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 KIF26AQ9ULI4 1882 aaPredicted RBP24.86■■□□□ 1.57
CTF1-202ENST00000395019 CBX4O00257 560 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 ZMPSTE24O75844 475 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 PIAS1O75925 651 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 IL9P15248 144 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 FCARP24071 287 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 NUMBP49757 651 aa24.86■■□□□ 1.57
CTF1-202ENST00000395019 SMAD2Q15796 467 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms