RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 TBL1YQ9BQ87 522 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 Q9H521 79 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 UBAP1Q9NZ09 502 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 FAM95CA0A1B0GW59 222 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 BCAS2O75934 225 aaPredicted RBP19.09■□□□□ 0.65
CBX1-202ENST00000393408 PMLP29590 882 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 ZNF33AQ06730 810 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 CTBP1Q13363 440 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 DCLRE1AQ6PJP8 1040 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 LILRA2Q8N149 483 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 CATSPER1Q8NEC5 780 aa19.09■□□□□ 0.65
CBX1-202ENST00000393408 AAR2Q9Y312 384 aaKnown RBP19.09■□□□□ 0.65
CBX1-202ENST00000393408 TCAF2A6NFQ2 919 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 TMEM233B4DJY2 109 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 STX16-NPEPL1H3BU86 382 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 PDHXO00330 501 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 NPHS1O60500 1241 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 VAPBO95292 243 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 CRTAMO95727 393 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 SRGAP2BP0DMP2 458 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 ETS2P15036 469 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 ARNTP27540 789 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 ARCN1P48444 511 aaKnown RBP19.08■□□□□ 0.64
CBX1-202ENST00000393408 COG7P83436 770 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 LSAMPQ13449 338 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 ART3Q13508 389 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 POU6F1Q14863 301 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 ARHGAP36Q6ZRI8 547 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 GPR142Q7Z601 462 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 RNF148Q8N7C7 305 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 ADCY4Q8NFM4 1077 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 DLG3Q92796 817 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 MAELQ96JY0 434 aaKnown RBP19.08■□□□□ 0.64
CBX1-202ENST00000393408 FTHL17Q9BXU8 183 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 COPS7BQ9H9Q2 264 aaPredicted RBP19.08■□□□□ 0.64
CBX1-202ENST00000393408 COL4A4P53420 1690 aaPredicted RBP19.08■□□□□ 0.64
CBX1-202ENST00000393408 PRSS51A0A1B0GVH4 220 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 ANKRD33BA6NCL7 494 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 TREHO43280 583 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 MT-CYBP00156 380 aaPredicted RBP19.08■□□□□ 0.64
CBX1-202ENST00000393408 CAPNS1P04632 268 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 STMN1P16949 149 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 GRB14Q14449 540 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 MFSD10Q14728 455 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 DENND5AQ6IQ26 1287 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 CCNYL1Q8N7R7 359 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 TSPYL2Q9H2G4 693 aaPredicted RBP19.08■□□□□ 0.64
CBX1-202ENST00000393408 NDUFA13Q9P0J0 144 aa19.08■□□□□ 0.64
CBX1-202ENST00000393408 SDHDO14521 159 aa19.07■□□□□ 0.64
CBX1-202ENST00000393408 ACOT8O14734 319 aa19.07■□□□□ 0.64
CBX1-202ENST00000393408 LHX1P48742 406 aa19.07■□□□□ 0.64
CBX1-202ENST00000393408 LDLRAD1Q5T700 205 aa19.07■□□□□ 0.64
CBX1-202ENST00000393408 ESRP1Q6NXG1 681 aaKnown RBP19.07■□□□□ 0.64
CBX1-202ENST00000393408 TAC4Q86UU9 113 aa19.07■□□□□ 0.64
CBX1-202ENST00000393408 SPATA6LQ8N4H0 392 aa19.07■□□□□ 0.64
CBX1-202ENST00000393408 ZNF419Q96HQ0 510 aaPredicted RBP19.07■□□□□ 0.64
CBX1-202ENST00000393408 FCRL5Q96RD9 977 aa19.07■□□□□ 0.64
CBX1-202ENST00000393408 NPAS2Q99743 824 aa19.07■□□□□ 0.64
CBX1-202ENST00000393408 OMDQ99983 421 aa19.07■□□□□ 0.64
CBX1-202ENST00000393408 MRPL46Q9H2W6 279 aaKnown RBP19.07■□□□□ 0.64
CBX1-202ENST00000393408 NEU3Q9UQ49 428 aa19.07■□□□□ 0.64
CBX1-202ENST00000393408 TIMM13Q9Y5L4 95 aaPredicted RBP19.07■□□□□ 0.64
CBX1-202ENST00000393408 PTCH2Q9Y6C5 1203 aa19.07■□□□□ 0.64
CBX1-202ENST00000393408 OR6B1O95007 311 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 PGM3O95394 542 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 CCNCP24863 283 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 TWF2Q6IBS0 349 aaKnown RBP19.06■□□□□ 0.64
CBX1-202ENST00000393408 TMEM86AQ8N2M4 240 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 TXNDC5Q8NBS9 432 aaKnown RBP19.06■□□□□ 0.64
CBX1-202ENST00000393408 IPMKQ8NFU5 416 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 PRICKLE1Q96MT3 831 aaPredicted RBP19.06■□□□□ 0.64
CBX1-202ENST00000393408 KLHL32Q96NJ5 620 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 PKP2Q99959 881 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 AP4B1Q9Y6B7 739 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 TRPC5OSA6NMA1 111 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 HSPA1AP0DMV8 641 aaKnown RBP19.06■□□□□ 0.64
CBX1-202ENST00000393408 HSPA1BP0DMV9 641 aaKnown RBP19.06■□□□□ 0.64
CBX1-202ENST00000393408 SLC1A2P43004 574 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 CRYBB1P53674 252 aaPredicted RBP19.06■□□□□ 0.64
CBX1-202ENST00000393408 PPHLN1Q8NEY8 458 aaKnown RBP19.06■□□□□ 0.64
CBX1-202ENST00000393408 FICDQ9BVA6 458 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 UNKQ9C0B0 810 aaKnown RBP19.06■□□□□ 0.64
CBX1-202ENST00000393408 GLOD4Q9HC38 313 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 PCDHGB4Q9UN71 923 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 PCDHGB5Q9Y5G0 923 aa19.06■□□□□ 0.64
CBX1-202ENST00000393408 DFFAO00273 331 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 TAS2R39P59534 338 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 SH2D4BQ5SQS7 431 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 PIWIL4Q7Z3Z4 852 aaKnown RBP19.05■□□□□ 0.64
CBX1-202ENST00000393408 CCDC117Q8IWD4 279 aaPredicted RBP19.05■□□□□ 0.64
CBX1-202ENST00000393408 ARHGAP12Q8IWW6 846 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 PELI3Q8N2H9 469 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 NPLOC4Q8TAT6 608 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 TMA16Q96EY4 203 aaKnown RBP19.05■□□□□ 0.64
CBX1-202ENST00000393408 SMARCD1Q96GM5 515 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 MRPL57Q9BQC6 102 aaKnown RBP19.05■□□□□ 0.64
CBX1-202ENST00000393408 RHOBTB2Q9BYZ6 727 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 UBE2OQ9C0C9 1292 aaKnown RBP19.05■□□□□ 0.64
CBX1-202ENST00000393408 OSBPL2Q9H1P3 480 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 ETAA1Q9NY74 926 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms