RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 STARD8Q92502 1023 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 PI4K2AQ9BTU6 479 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.62□□□□□ -1.83
XRN1-202ENST00000392981 IQCGQ9H095 443 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 OR10A5Q9H207 317 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 MINDY3Q9H8M7 445 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 SYNPO2LQ9H987 977 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 PPP1R14DQ9NXH3 145 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 KLQ9UEF7 1012 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ZDHHC8Q9ULC8 765 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 CCL27Q9Y4X3 112 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 SLC4A4Q9Y6R1 1079 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 C15orf38-AP3S2A0A0A6YYH1 394 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 FITM1A5D6W6 292 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 GLOD5A6NK44 160 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 CAPN14A8MX76 684 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 F5H697 171 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 TP73O15350 636 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 VEGFDO43915 354 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 RTN2O75298 545 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 HAUS5O94927 633 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 PROCP04070 461 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 TUBBP07437 444 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 MYL6BP14649 208 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 CCNA2P20248 432 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 CALB2P22676 271 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 PTPN3P26045 913 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 PNPLA4P41247 253 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 CTXN1P60606 82 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 BASP1P80723 227 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 FAM189BP81408 668 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 SLFN5Q08AF3 891 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 BNIP1Q12981 228 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 IKZF1Q13422 519 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 IL11RAQ14626 422 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 NFIXQ14938 502 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 AOC3Q16853 763 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 TMEM108Q6UXF1 575 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 GDPD5Q8WTR4 605 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 CFHR4Q92496 578 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 LPGAT1Q92604 370 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 NCLNQ969V3 563 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 DUSP23Q9BVJ7 150 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 NDEL1Q9GZM8 345 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 RPF1Q9H9Y2 349 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 VPS18Q9P253 973 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 HAO1Q9UJM8 370 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 LOC100509620A0A075B734 347 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 KRBA1A5PL33 1030 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ZNF839A8K0R7 811 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 FGFR1OPO95684 399 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 TMEM225BP0DP42 221 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 GPR15P49685 360 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ARFIP1P53367 373 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ZNF844Q08AG5 666 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 DBPQ10586 325 aaPredicted RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 PLA2G7Q13093 441 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 BYSLQ13895 437 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 CENPQQ7L2Z9 268 aaPredicted RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 PIGWQ7Z7B1 504 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 AACSQ86V21 672 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 SERPINA12Q8IW75 414 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 TC2NQ8N9U0 490 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 AGPAT3Q9NRZ7 376 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ZCCHC3Q9NUD5 404 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 ERVK13-1Q9NX77 482 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 RCOR1Q9UKL0 485 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ANGPTL2Q9UKU9 493 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 A8MUI8 341 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 FOXO6A8MYZ6 492 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 TTI1O43156 1089 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 SRCP12931 536 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ADORA2AP29274 412 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 PPP2R1AP30153 589 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 SARNPP82979 210 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 ASPHQ12797 758 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ZC2HC1CQ53FD0 456 aaPredicted RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 DENND1BQ6P3S1 775 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 EIF3MQ7L2H7 374 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 TTC5Q8N0Z6 440 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 RNF169Q8NCN4 708 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 SNX19Q92543 992 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 MR1Q95460 341 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 FCRL2Q96LA5 508 aaPredicted RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 CDK5RAP1Q96SZ6 601 aaKnown RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 TMEM168Q9H0V1 697 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 VCX2Q9H322 139 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 TMEM206Q9H813 350 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 EVA1AQ9H8M9 152 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 LRRC40Q9H9A6 602 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 SLC6A13Q9NSD5 602 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ERAP1Q9NZ08 941 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 TUBE1Q9UJT0 475 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 EYSQ5T1H1 3165 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ABCC8Q09428 1581 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 RUSC2Q8N2Y8 1516 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 ZSCAN5CA6NGD5 496 aaPredicted RBP3.62□□□□□ -1.83
XRN1-202ENST00000392981 ACOT7O00154 380 aa3.62□□□□□ -1.83
XRN1-202ENST00000392981 CES2O00748 559 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms