RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 CPSF2Q9P2I0 782 aaKnown RBP25.92■■□□□ 1.74
SMARCD3-203ENST00000392811 PCDHB12Q9Y5F1 795 aa25.92■■□□□ 1.74
SMARCD3-203ENST00000392811 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 SLC35E2BP0CK96 405 aa25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 PAMP19021 973 aa25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 SLC1A2P43004 574 aa25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 CPA2P48052 419 aa25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 DSC2Q02487 901 aa25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 ELAVL2Q12926 359 aaKnown RBP25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 THOC5Q13769 683 aaKnown RBP25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 WASHC2DQ5SRD0 308 aa25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 KIAA0930Q6ICG6 404 aaPredicted RBP25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 RFWD3Q6PCD5 774 aa25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 MFSD6LQ8IWD5 586 aa25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 CRIPAKQ8N1N5 446 aa25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 BCL7CQ8WUZ0 217 aaPredicted RBP25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 PRKD2Q9BZL6 878 aa25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.91■■□□□ 1.74
SMARCD3-203ENST00000392811 TBKBP1A7MCY6 615 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 H7C4K7 107 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 PEX11AO75192 247 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 MMP2P08253 660 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 SMARCB1Q12824 385 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 UBAP2LQ14157 1087 aaKnown RBP25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 IHHQ14623 411 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 PRSS55Q6UWB4 352 aaPredicted RBP25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 TEX26Q8N6G2 289 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 TEX9Q8N6V9 391 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 MYEOVQ96EZ4 313 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 OXCT2Q9BYC2 517 aaPredicted RBP25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 COMMD8Q9NX08 183 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 RPL26L1Q9UNX3 145 aaKnown RBP25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 MIA3Q5JRA6 1907 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 ZNF195O14628 629 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 TRIM13O60858 407 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 ZDHHC11BP0C7U3 371 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 ALOX15P16050 662 aaPredicted RBP25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 RING1Q06587 406 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 SLC12A1Q13621 1099 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 RCN2Q14257 317 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 NADSYN1Q6IA69 706 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 ANKS3Q6ZW76 656 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 TTPALQ9BTX7 342 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 ACE2Q9BYF1 805 aaPredicted RBP25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 UBE2OQ9C0C9 1292 aaKnown RBP25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 VPS45Q9NRW7 570 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 DNAJC28Q9NX36 388 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 TAGLN3Q9UI15 199 aa25.9■■□□□ 1.74
SMARCD3-203ENST00000392811 FAM95CA0A1B0GW59 222 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 TTC24A2A3L6 582 aaPredicted RBP25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 PRR5-ARHGAP8B1AHC4 643 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 TLR5O60602 858 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 RAMP2O60895 175 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 APOA4P06727 396 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 IDH3AP50213 366 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 ARHGAP8P85298 464 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 POLD3Q15054 466 aaPredicted RBP25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 TBCCQ15814 346 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 RABGAP1LQ5R372 815 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 ZNF470Q6ECI4 717 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 TMEM151AQ8N4L1 468 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 C2CD4AQ8NCU7 369 aaPredicted RBP25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 KCTD4Q8WVF5 259 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 TSNARE1Q96NA8 513 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 TMEM175Q9BSA9 504 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 FAM96AQ9H5X1 160 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 EBF2Q9HAK2 575 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 OXSMQ9NWU1 459 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 MID2Q9UJV3 735 aa25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 APOBEC2Q9Y235 224 aaKnown RBP25.89■■□□□ 1.74
SMARCD3-203ENST00000392811 SLC38A8A6NNN8 435 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 B2RBV5 119 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 TMEM114B3SHH9 223 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 TK2O00142 265 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 HOXA2O43364 376 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 HSPA4LO95757 839 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 SBK3P0C264 359 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 ATF6P18850 670 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 SERPINH1P50454 418 aaKnown RBP25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 GTF2A1P52655 376 aaPredicted RBP25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 CEP97Q8IW35 865 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 CENPLQ8N0S6 344 aaPredicted RBP25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 PGBD5Q8N414 524 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 NSMCE1Q8WV22 266 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 SREK1Q8WXA9 508 aaKnown RBP25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 MCUR1Q96AQ8 359 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 FAM167BQ9BTA0 163 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 MRPL9Q9BYD2 267 aaKnown RBP25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 NKX1-2Q9UD57 310 aaPredicted RBP25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 RUVBL2Q9Y230 463 aaKnown RBP25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 CDY1Q9Y6F8 540 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 HEATR9A2RTY3 570 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 PITPNM1O00562 1244 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 ANP32DO95626 131 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 POLD2P49005 469 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 RAB10P61026 200 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 TNK2Q07912 1038 aa25.88■■□□□ 1.73
SMARCD3-203ENST00000392811 IL10RBQ08334 325 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms