RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 TRABD2AQ86V40 505 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 NARFQ9UHQ1 456 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 REXO2Q9Y3B8 237 aaKnown RBP16.31■□□□□ 0.2
SHANK1-204ENST00000391814 CCRL2O00421 344 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 CYP2C9P11712 490 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 GUCA1AP43080 201 aaPredicted RBP16.31■□□□□ 0.2
SHANK1-204ENST00000391814 SLC12A3P55017 1021 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 BST2Q10589 180 aaKnown RBP16.31■□□□□ 0.2
SHANK1-204ENST00000391814 PTCHD4Q6ZW05 846 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 UBE2J2Q8N2K1 259 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 USP7Q93009 1102 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 TUBGCP5Q96RT8 1024 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 MORF4L1Q9UBU8 362 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 WASF2Q9Y6W5 498 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 CDC42BPAQ5VT25 1732 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 TSPAN3O60637 253 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 CCNE2O96020 404 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 CYP2A7P20853 494 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 ACVR2BQ13705 512 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 LIPMQ5VYY2 423 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 SLC9A4Q6AI14 798 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 SULT1C3Q6IMI6 304 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 SCIMPQ6UWF3 145 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 ERVK-5Q9HDB9 667 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 TAS2R13Q9NYV9 303 aa16.31■□□□□ 0.2
SHANK1-204ENST00000391814 UGT2B11O75310 529 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 CAPN15O75808 1086 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 RPL22P35268 128 aaKnown RBP16.3■□□□□ 0.2
SHANK1-204ENST00000391814 CDK9P50750 372 aaKnown RBP16.3■□□□□ 0.2
SHANK1-204ENST00000391814 HYIQ5T013 277 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 ARMC8Q8IUR7 673 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 TRIM48Q8IWZ4 208 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 GFM1Q96RP9 751 aaKnown RBP16.3■□□□□ 0.2
SHANK1-204ENST00000391814 RNF181Q9P0P0 153 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 TSPAN16Q9UKR8 245 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 CYB561D2O14569 222 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 TOR1BO14657 336 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 SERPINA1P01009 418 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 ENO2P09104 434 aaPredicted RBP16.3■□□□□ 0.2
SHANK1-204ENST00000391814 FDX1P10109 184 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 SPOCK2Q92563 424 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 TSPAN18Q96SJ8 248 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 ADGRE3Q9BY15 652 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 KIAA1257Q9ULG3 409 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 NCAM2O15394 837 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 SIN3BO75182 1162 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 OR1G1P47890 313 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 MAMLD1Q13495 774 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 PRR5LQ6MZQ0 368 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 GLT6D1Q7Z4J2 308 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 AADATQ8N5Z0 425 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 ACSS2Q9NR19 701 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 MLXQ9UH92 298 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 ADAM28Q9UKQ2 775 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 H3BNX3 289 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 PRG2P13727 222 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 BICRALQ6AI39 1079 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 SQORQ9Y6N5 450 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 MMP10P09238 476 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 HNRNPLP14866 589 aaKnown RBP eCLIP16.3■□□□□ 0.2
SHANK1-204ENST00000391814 ALDH4A1P30038 563 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 TKTL1P51854 596 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 CDC42EP1Q00587 391 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 ECT2LQ008S8 904 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 CCDC36Q8IYA8 594 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 SAMHD1Q9Y3Z3 626 aaKnown RBP16.3■□□□□ 0.2
SHANK1-204ENST00000391814 U3KQV3 271 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 ASTN2O75129 1339 aaPredicted RBP16.3■□□□□ 0.2
SHANK1-204ENST00000391814 FAM155BO75949 473 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 AP2A2O94973 939 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 CSF1RP07333 972 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 CCR1P32246 355 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 GPR15P49685 360 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 SLC7A2P52569 658 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 SMIM5Q71RC9 77 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 MIB1Q86YT6 1006 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 TTLL6Q8N841 843 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 GRPEL2Q8TAA5 225 aa16.3■□□□□ 0.2
SHANK1-204ENST00000391814 CCDC189A1A4V9 331 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 SLC11A2P49281 568 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 SLC1A5Q15758 541 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 SCUBE3Q8IX30 993 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 LSM14AQ8ND56 463 aaKnown RBP16.29■□□□□ 0.2
SHANK1-204ENST00000391814 EDEM1Q92611 657 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 MED28Q9H204 178 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 SLC35C2Q9NQQ7 365 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 AP3M1Q9Y2T2 418 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 DHRS7Q9Y394 339 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 PTGR2Q8N8N7 351 aaPredicted RBP16.29■□□□□ 0.2
SHANK1-204ENST00000391814 PIH1D2Q8WWB5 315 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 C12orf65Q9H3J6 166 aaKnown RBP16.29■□□□□ 0.2
SHANK1-204ENST00000391814 C8orf4Q9NR00 106 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 KLQ9UEF7 1012 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 TBC1D30Q9Y2I9 924 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 GPC6Q9Y625 555 aaPredicted RBP16.29■□□□□ 0.2
SHANK1-204ENST00000391814 CASKO14936 926 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 CAPGP40121 348 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 LCN1P1Q5VSP4 162 aa16.29■□□□□ 0.2
SHANK1-204ENST00000391814 UNC5AQ6ZN44 842 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms