RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 SLC25A41Q8N5S1 370 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 PPM1NQ8N819 430 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 LEMD2Q8NC56 503 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 NSMCE3Q96MG7 304 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 FCRL3Q96P31 734 aaPredicted RBP12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 CYTH2Q99418 400 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 CHRAC1Q9NRG0 131 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 SAMD15Q9P1V8 674 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 LGALS13Q9UHV8 139 aa12.37□□□□□ -0.43
SPTBN1-203ENST00000389980 LINC01565O15544 149 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 PSMD3O43242 534 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 SPAG6O75602 509 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 PGAM1P18669 254 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 STX2P32856 288 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 MSH2P43246 934 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 KCNC3Q14003 757 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 POU6F1Q14863 301 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 CRYMQ14894 314 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 KLHL38Q2WGJ6 581 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 MPPE1Q53F39 396 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 LINC00523Q86TU6 105 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 MDM1Q8TC05 714 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 DCAKDQ8WVC6 231 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 ALG14Q96F25 216 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 ZNF778Q96MU6 729 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 LRRC3BQ96PB8 259 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 POLR1EQ9GZS1 481 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 PPANQ9NQ55 473 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 OR51B4Q9Y5P0 310 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 WNT6Q9Y6F9 365 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 RPS6KL1Q9Y6S9 549 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 ZNF197O14709 1029 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 ZMPSTE24O75844 475 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 GLP2RO95838 553 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 MT-CO1P00395 513 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 CD70P32970 193 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 PPP2R2AP63151 447 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 TNK2Q07912 1038 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 LMAN2Q12907 356 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 MPP3Q13368 585 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 CYTH1Q15438 398 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 ZNF77Q15935 545 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 FYB2Q5VWT5 728 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 STEAP4Q687X5 459 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 RANBP10Q6VN20 620 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 TDRPQ86YL5 185 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 SRRM1Q8IYB3 904 aaKnown RBP12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 TIFAQ96CG3 184 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 MFSD3Q96ES6 412 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 ZNF599Q96NL3 588 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 SELENOSQ9BQE4 189 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 DHRS4Q9BTZ2 278 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 CINPQ9BW66 212 aaPredicted RBP12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 LMAN2LQ9H0V9 348 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 KIF9Q9HAQ2 790 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 PSMC3IPQ9P2W1 217 aaPredicted RBP12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 SLC24A2Q9UI40 661 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 VPS51Q9UID3 782 aa12.36□□□□□ -0.43
SPTBN1-203ENST00000389980 BRWD1Q9NSI6 2320 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 F7P08709 466 aaPredicted RBP12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 PRKCHP24723 683 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 NMBRP28336 390 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 VIPR2P41587 438 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 NPY2RP49146 381 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 SCNN1BP51168 640 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 ELMSAN1Q6PJG2 1045 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 ADGRD1Q6QNK2 874 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 MICALCLQ6ZW33 695 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 ATP2A3Q93084 1043 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 ZNF669Q96BR6 464 aaPredicted RBP12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 RSPRY1Q96DX4 576 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 SFXN1Q9H9B4 322 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 NOD2Q9HC29 1040 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 SEPT3Q9UH03 358 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 FCF1Q9Y324 198 aaKnown RBP12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 A0A1W2PPM1 405 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 NEDD8-MDP1E9PL57 170 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 K7ERQ8 282 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 KIF1CO43896 1103 aaKnown RBP12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 TMCC1O94876 653 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 POLBP06746 335 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 ERVK-10P10266 1014 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 KRT15P19012 456 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 ASTLQ6HA08 431 aaPredicted RBP12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 ZNF783Q6ZMS7 281 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 TDHQ8IZJ6 230 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 SLC44A1Q8WWI5 657 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 MRPL38Q96DV4 380 aaKnown RBP12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 PSKH2Q96QS6 385 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 MGME1Q9BQP7 344 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 IL22Q9GZX6 179 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 STMN4Q9H169 189 aaPredicted RBP12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 MOCS1Q9NZB8 636 aa12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 INTS6Q9UL03 887 aaKnown RBP12.35□□□□□ -0.43
SPTBN1-203ENST00000389980 FAM159BA6NKW6 160 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 CYBBP04839 570 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 POU2F2P09086 479 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 GSTA2P09210 222 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 HYAL1Q12794 435 aa12.34□□□□□ -0.43
SPTBN1-203ENST00000389980 USP4Q13107 963 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms