RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 RAD21L1Q9H4I0 556 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 CD300AQ9UGN4 299 aa14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 SEPT9Q9UHD8 586 aaPredicted RBP14.84□□□□□ -0.03
VPS9D1-201ENST00000389386 BCLAF3A2AJT9 711 aaKnown RBP14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 LTFP02788 710 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 HSPA1AP0DMV8 641 aaKnown RBP14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 HSPA1BP0DMV9 641 aaKnown RBP14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 TPSB2P20231 275 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 CCND2P30279 289 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 ACOT2P49753 483 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 HLCSP50747 726 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 E2F2Q14209 437 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 TPSAB1Q15661 275 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 C6orf10Q5SRN2 563 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 CMC1Q7Z7K0 106 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 SLC4A11Q8NBS3 891 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 ZC3H15Q8WU90 426 aaKnown RBP14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 LRRN4Q8WUT4 740 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 CANT1Q8WVQ1 401 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 CYGBQ8WWM9 190 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 SNX19Q92543 992 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 R3HDMLQ9H3Y0 253 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 CD320Q9NPF0 282 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 SCUBE2Q9NQ36 999 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 CDYLQ9Y232 598 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 PCDHA10Q9Y5I2 948 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 KPNA7A9QM74 516 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 PSMD11O00231 422 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 CHEK2O96017 543 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 JUNBP17275 347 aaPredicted RBP14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 CCR10P46092 362 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 LIG4P49917 911 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 ADAM17P78536 824 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 SP2Q02086 613 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 ZNF394Q53GI3 561 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 RAVER1Q8IY67 606 aaKnown RBP14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 PEX5LQ8IYB4 626 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 OFCC1Q8IZS5 231 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 LILRB4Q8NHJ6 448 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 STON2Q8WXE9 905 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 RNF157Q96PX1 679 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 YTHDF1Q9BYJ9 559 aaKnown RBP14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 IMPG2Q9BZV3 1241 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 ELP3Q9H9T3 547 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 HMG20AQ9NP66 347 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 ACSS2Q9NR19 701 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 SNX15Q9NRS6 342 aa14.83□□□□□ -0.04
VPS9D1-201ENST00000389386 MGEA5O60502 916 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 H2AFYO75367 372 aaKnown RBP14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 S100BP04271 92 aaPredicted RBP14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 JUNP05412 331 aaKnown RBP14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 KCNA2P16389 499 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 YAP1P46937 504 aaKnown RBP14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 KRT76Q01546 638 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 GHRHRQ02643 423 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 DNASE1L3Q13609 305 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 MTERF2Q49AM1 385 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 GTF2IRD2BQ6EKJ0 949 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 DENND1BQ6P3S1 775 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 USP43Q70EL4 1123 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 TAS1R3Q7RTX0 852 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 DSG4Q86SJ6 1040 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 GTF2IRD2Q86UP8 949 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 SEPT8Q92599 483 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 CENPOQ9BU64 300 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 FANCEQ9HB96 536 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 AS3MTQ9HBK9 375 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 SARDHQ9UL12 918 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 SCN4AP35499 1836 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 CENPFP49454 3210 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 NOTOA8MTQ0 251 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 MAP3K6O95382 1288 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 UGT2B4P06133 528 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 MZF1P28698 734 aaPredicted RBP14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 MAGEA12P43365 314 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 PTPN9P43378 593 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 JAK3P52333 1124 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 HK2P52789 917 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 CRADDP78560 199 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 NAB1Q13506 487 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 BFSP2Q13515 415 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 LRP8Q14114 963 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 PPP2R2DQ66LE6 453 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 GK5Q6ZS86 529 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 Q8N9G6 341 aaPredicted RBP14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 BPIFB6Q8NFQ5 453 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 SLC7A14Q8TBB6 771 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 NSUN6Q8TEA1 469 aaKnown RBP14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 CDCA5Q96FF9 252 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 AKIP1Q9NQ31 210 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 KLQ9UEF7 1012 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 CYTH4Q9UIA0 394 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 ZDHHC2Q9UIJ5 367 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 ARID2Q68CP9 1835 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 WDR81Q562E7 1941 aa14.82□□□□□ -0.04
VPS9D1-201ENST00000389386 RGS13O14921 159 aa14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 MBL2P11226 248 aaPredicted RBP14.81□□□□□ -0.04
VPS9D1-201ENST00000389386 RAD23AP54725 363 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms